Query= MSMg01no510_f22.b1 MSMg01no510_f22.b1 CHROMAT_FILE:
MSMg01no510_f22.b1 PHD_FILE: MSMg01no510_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:56 2005
(690 letters)
>mm_chrX_82381264_82382349
Length = 1086
Score = 1270 bits (657), Expect = 0.0
Identities = 681/691 (98%), Gaps = 5/691 (0%)
Strand = Plus / Minus
Query: 1 tgggtctctgatttcttgtgccttctcttgggctcttttccttctatatgtttgtcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tgggtctctgatttcttgtgccttctcttgggctcttttccttctatatgtttgtcttgt 937
Query: 61 ccaacttaaatgggatactttttatttcttcttattatata-tttttttaaaaaaatgat 119
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 936 ccaacttaaatgggatactttttatttcttcttattatatatttttttttaaaaaatgat 877
Query: 120 ctacctaatttttacttactttgatttcttatgtgcttagctgcctacgatcttttcata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ctacctaatttttacttactttgatttcttatgtgcttagctgcctacgatcttttcata 817
Query: 180 atttctggacatactttgtacgaatgaaccacattctccacagatgatttcttcttttgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atttctggacatactttgtacgaatgaaccacattctccacagatgatttcttcttttgg 757
Query: 240 tattgacaaaaatatagaggcactacttactctaaaaccattctaaattgaatatattgc 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tattgacaaaaatagagaggcactacttactctaaaaccattctaaattgaatatattgc 697
Query: 300 atggcatctttagtagaatacagctactaagtgaagtgccatcacatcctgcccctttca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atggcatctttagtagaatacagctactaagtgaagtgccatcacatcctgcccctttca 637
Query: 360 gcacatactttgctaataaaggatctagctacatcatgttagaatgacaagtagaattgg 419
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 636 gcacatactttgctattaaaggatctagctacatcatgtcagaatgacaagtagaattgg 577
Query: 420 accaaggctccatttactttgtaacacttgaccccactgcagcagtactctagtccttac 479
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atcaaggctccatttactttgtaacacttgaccccactgcagcagtactctagtccttac 517
Query: 480 taactcctaatgacaaatgtaacaccaaattaatgagctttttagccttgggattgcctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 taactcctaatgacaaatgtaacaccaaattaatgagctttttagccttgggattgcctt 457
Query: 540 gttacaaaatggtattgatgcaatccactgatcaaaaagatctgccaatccctttcccct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gttacaaaatggtattgatgcaatccactgatcaaaaagatctgccaatccctttcccct 397
Query: 600 atgtcagagtcatcacagacaaactgggatattttttttttaaggaatcatttagattct 659
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 396 atgtcagagtcatcacagacaaactgggat----tttttttaaggaatcatttagattct 341
Query: 660 taatggaaagatgaaaaaaagatcatgcaag 690
|||||||||||||||||||||||||||||||
Sbjct: 340 taatggaaagatgaaaaaaagatcatgcaag 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1086
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1076
Effective search space: 731680
Effective search space used: 731680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_f22.g1 MSMg01no510_f22.g1 CHROMAT_FILE:
MSMg01no510_f22.g1 PHD_FILE: MSMg01no510_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:56 2005
(686 letters)
>mm_chrX_82205385_82206467
Length = 1083
Score = 1257 bits (650), Expect = 0.0
Identities = 677/688 (98%), Gaps = 7/688 (1%)
Strand = Plus / Plus
Query: 1 tcagattatttctaaatatgttagggattgagacccaggttgaaggagcagaattcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagattatttctaaatatgttagggattgagacccaggttgaaggagcagaattcactg 260
Query: 61 cctggggcatgttttcatagcagattgccagcacacaagagaacaaacctctgttcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 cctggggcatgttttcatagcagattgccagcacacaagagaacaaacctctgttca-gt 319
Query: 121 ctacagcacatctcctaaagcaagggacaagtgtgaagccacactattcaccaggaaaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 320 ctacagcacatctcctaaagcaagggacaagtgtgaagccacactgttcaccaggaaaag 379
Query: 181 actgtggctagagtatgcagatttaattcttttacaatggactaaaaattggacacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 actgtggctagagtatgcagatttaattcttttacaatggactaaaaattggacacaaat 439
Query: 241 taagac--tctttctcattagctgattttctttaattactttcatacccttaactctttc 298
|||||| || | |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 taagaccatc---c-cattagctgattttctttaattactttcatacccttgactctttc 495
Query: 299 tcagtcttcttatcttggttctagatggatatatccatcacctctagtcatttggttttt 358
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 496 tcagtcttcttatcttggttctagatggatatatccatcacctgtagtcatttggttttt 555
Query: 359 aatatctgagctgctccccactgtctcaggtttccagtttgactttccttgaaatttccc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatatctgagctgctccccactgtctcaggtttccagtttgactttccttgaaatttccc 615
Query: 419 tggtgcctaatacaataacactcgcacagagagcattcagcaaatggtgttgactgcctg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tggtgcctaatacaataacactcgcacagagagcattcagcaaatggtgttgactgcctg 675
Query: 479 ccgtcttttaaaagcacatctggatcgactctaaaggcacctggcaatattacactgact 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ccgtcttttaaaagcacatctggatcgactctaaaggcacctggcaatattacactgact 735
Query: 539 tgttagtaacctgacttaacccagatggcccaaagattgtaaccactgttacctgataat 598
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 736 tgttagtaacctgacttaacccagatggcccaaagattgtaagcactgttacctgataat 795
Query: 599 gtcgtcatctggctctcttcaaatttattcagaaatactatgagcagaagttggacacca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gtcgtcatctggctctcttcaaatttattcagaaatactatgagcagaagttggacacca 855
Query: 659 ctcttttcctacacatacatacacacct 686
||||||||||||||||||||||||||||
Sbjct: 856 ctcttttcctacacatacatacacacct 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1083
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1073
Effective search space: 725348
Effective search space used: 725348
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
