Query= MSMg01no511_a07.b1 MSMg01no511_a07.b1 CHROMAT_FILE:
MSMg01no511_a07.b1 PHD_FILE: MSMg01no511_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:45 2005
(428 letters)
>mm_chrX_160232275_160233102
Length = 828
Score = 756 bits (391), Expect = 0.0
Identities = 412/419 (98%), Gaps = 3/419 (0%)
Strand = Plus / Minus
Query: 12 gaattcatcc-aatttgccttgctagtcatttgaacagaaaaataaaacaaaacaaaa-g 69
|||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 704 gaattcatccaaatgggcc-tgctagtcatttgaacagaaaaacaaaacaaaacaaaaca 646
Query: 70 aacaaacaaacaaacaacaacaacaataacacttccaaggaaagactactttcattttcc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aacaaacaaacaaacaacaacaacaataacacttccaaggaaagactactttcattttcc 586
Query: 130 tggggtgacatgaacaaatgtttattcatcctcacatgggggtttgataatgttatgggt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tggggtgacatgaacaaatgtttattcatcctcacatgggggtttgataatgttatgggt 526
Query: 190 aggtcccatttgtcttgaccacagcatcagtcttggtccttgtgctcccaaacgagaaga 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 aggtcccatttgtcttgaccacagcatcagtcttggtccttgtgctcccaaacgagaaga 466
Query: 250 attcacatagaacacagtagtagagcaaagagctagattaaatagagcaatcaaggaagc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 attcacatagaacacagtagtagagcaaagagctagattaaatagagcaatcaaggaagc 406
Query: 310 aagagtgtactttttacaataagtgcaaaggcccaaatctggacagtcactggaggctta 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aagagtgtactttttacaataagtgcaaaggcccaaatctggacagtcactggaggctta 346
Query: 370 tatttctcttttccctgttatcccttctcctgttgttgggttgttaggcaggcattagt 428
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tatttctcttttccctgttatcccttctcctgttgttgggttgttaggcaggcattagt 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_a07.g1 MSMg01no511_a07.g1 CHROMAT_FILE:
MSMg01no511_a07.g1 PHD_FILE: MSMg01no511_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:45 2005
(476 letters)
>mm_chrX_160099085_160099960
Length = 876
Score = 920 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Plus
Query: 1 aaagcacatcctgtgaggaaagatcagaggatcatttctgaccttcctcactgccaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagcacatcctgtgaggaaagatcagaggatcatttctgaccttcctcactgccaatgt 260
Query: 61 tctctggtgttattgacaagtgttctcttttcaaaaggctacagcccaaataattacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctggtgttattgacaagtgttctcttttcaaaaggctacagcccaaataattacctt 320
Query: 121 catcttcattttcacagaagcggggaagttaatacctaattaaaataccaacccaattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcttcattttcacagaagcggggaagttaatacctaattaaaataccaacccaattaa 380
Query: 181 agataaacatctcaagccagtatccagatcattggatgaaaataattactaacgtcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agataaacatctcaagccagtatccagatcattggatgaaaataattactaacgtcccag 440
Query: 241 atttgaatgtgttttagaattttcaaagaaacccaaatcgaatatgatttgtgatgctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgaatgtgttttagaattttcaaagaaacccaaatcgaatatgatttgtgatgctgc 500
Query: 301 ccaccaaccaaagacacaggactcactcccgagctctacaagcggaatttaatgttctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaccaaccaaagacacaggactcactcccgagctctacaagcggaatttaatgttctgg 560
Query: 361 ccaggaaccactgcaacttggtattgattttccgtgctcaatttctctcccaactcttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaggaaccactgcaacttggtattgattttccgtgctcaatttctctcccaactcttgg 620
Query: 421 tctttcacttgaagataatttcattactatcgagaagcttgggctgcatggaatga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctttcacttgaagataatttcattactatcgagaagcttgggctgcatggaatga 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
