Query= MSMg01no511_g03.b1 MSMg01no511_g03.b1 CHROMAT_FILE:
MSMg01no511_g03.b1 PHD_FILE: MSMg01no511_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:14 2005
(351 letters)
>mm_chrX_158475231_158475980
Length = 750
Score = 603 bits (312), Expect = e-177
Identities = 339/348 (97%), Gaps = 1/348 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgcatattcctcctattgacagcaggttggctctctaagtgcaatagcctcaa 63
||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgcagagtagtcctattgacagcaggttggctctctaagtgcaatagcctcaa 263
Query: 64 ttccttagtttttttttctcggcctcaaataatagcctatttctaagtctggccaatgaa 123
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 ttccttagtttttttt-ctcggcctcaaataatagcctatttctaagcctggccaatgaa 322
Query: 124 ataaaccgcttatctacaaaatataatgaaataacttaatgtagaatgttgctcaaaagt 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 ataaaccgcttatctacaaaatagaatgaaataacttaatgtagaatgttgctcaaaagt 382
Query: 184 caatggctaaacaaaccccatatcttcagttaaatgatccattaaagccttgtggctgca 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 383 caatggctaaacaaaccccatatcttcagttaaatgatccattaaagcctcgtggctgca 442
Query: 244 tcaagaagtccaaaaatacaatgtcagagagatgaagctggagttgctttctatatgcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaagaagtccaaaaatacaatgtcagagagatgaagctggagttgctttctatatgcag 502
Query: 304 caatatctgaatccgaacacagactcatatctcatggtaaaaagggta 351
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 caatatctgaatccgaagacagactcatatctcatggtaaaaagggta 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g03.g1 MSMg01no511_g03.g1 CHROMAT_FILE:
MSMg01no511_g03.g1 PHD_FILE: MSMg01no511_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:14 2005
(311 letters)
>mm_chrX_158680690_158681398
Length = 709
Score = 567 bits (293), Expect = e-166
Identities = 306/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Minus
Query: 1 gcagaaatctggccaatttgaaggaaggcagtacctagaacatgccagagcacccagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 509 gcagaaatctggccaatttgaaggaaggcagtacctagaacatgccagagcacccagatc 450
Query: 61 cttgggcacattacctcagcatcagggatgatggaagatatgcgtgaatcccacatccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cttgggcacattacctcagcatcagggatgatggaagatatgcgtgaatcccacatccct 390
Query: 121 ccaaatgcagggagatggataaatattggtattttttttccttcttatcatgaagtttgc 180
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 389 ccaaatgcagggagatggataaatattggta--ttttttccttcttatcatgaagtttgc 332
Query: 181 cttatcatacttaatttttcaccagcatggggagttatgtgttagtatagtacaacctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cttatcatacttaatttttcaccagcatggggagttatgtgttagtatagtacaacctac 272
Query: 241 tccactgcacttctgtgccctataaggacttgcagttggtgatggttttcttaagacaaa 300
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 tccactgcacttcagtgccctataaggacttgcagttggtgatggctttcttaagacaaa 212
Query: 301 tcccctaagag 311
|||||||||||
Sbjct: 211 tcccctaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 709
Length adjustment: 9
Effective length of query: 302
Effective length of database: 700
Effective search space: 211400
Effective search space used: 211400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
