ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCAGAACATTTCTCCGGCTACACAGAGAAACCCTGTCTCGAAAACAAA
CAAACAAACAAAAAAATACTGAGCTGGAAAAAGTCCCTTGATGAATCTAC
CGTGTGGGGTGTCACACAGAAGAATCAAGGATGTCTAAGAAAGTATGGGG
TAGATGACTTTGAAGGCTTCCAATAGCACTAAACATCCATAACTGTCATT
GATACAGCTATGAAAGCCTACAGGAAAACTACAAAAAAAAACAGTACTTC
GGTTTTTTAAGAATATTAAATATAGGGAAAACCTAAAATTCGACCTAAGG
ATTAAAGCAAAGATACACAGGCAGGTAGCATTAGCCCCAACATGGAACTT
GTACTACAGATAACCTAGAGAGGAAATATAATTAAAAGAGAAATAGCTGA
AGGGGTCAGGAGAAATTGGTTTTAAAAGAGACTCAACAGGAAAAAGAAAC
CTGATTTAAAAATAAGTAATCAGTGCTGTGGAGATGGCTCAGTGGTTAAG
AGCACTGCTGCTCTTCCAGAGGACCCAGGTTCAATTCCCAGCACTCACAT
GGCAGCTCACAACTATCTGTAACTCCTGTTCCAGGGGATCCAACACCCTC
AGACAGACATACATGCAGTCAAAACACCCATATACATAAAATAAATATTT
TTTTAAAAAAGTAATCATAGCTAGATATAGTGACA

AATATAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGAGCCTTACCGATATAGATGAGGATG
CTCACAGCCAACCATTGGACTGAGCATGGGGACCCCAGTGGAGGAGTTAG
GGGAAGGACTGAAGGAGCTGATGGGGTTAGCAGCTCCATAGGAAGAACAA
TAATATCAACTAGCCAGTAACACCCCCCACCCCCGAGCTCCCAAGGACTA
AACCACTAACCAAAGAGTACACATGGAGGGACCCATGGCTCTAGCTGCAC
ATGTAGCAGAGGATGGCCTTGTCGGTCTGTCATCAATGGGAAGGGAAGCC
CTTGGTTCTGTGGAGGCTTGATGCCCCAGCATAGAAGAATGCTAGGGTGG
TAAGGTGGGAGTCAGTGGGTGAGTGGGGGAGCTCCTTCATAGAGGCAGGG
GGAGGAGGGATGGGATAGGGGGCTTTCAGAGTATAAACCAGGAAAGAGGA
CAACATTTGAAATGTTAACAAAGAATATAGACAATTAAAAAAATTATGTT
TTGAATAGACCCTAAATAATATACTGGTCCATGTGTGTGCGTGTGTGCCT
GTGCGCCTGTGCGTTTATGCCCGTATCCCGTTGTTTGNGGTGAAATATTC
TTGCGTTTTTTGCCCGGCCATATTATTACTGGCTTGTTCTTTTTTGTTCC
CTCCCTATTTTCCCCTGAGAGCCTTCCCTTTTTTTTTCCCGTCTTT

Query= MSMg01no511_k18.b1 MSMg01no511_k18.b1 CHROMAT_FILE:
MSMg01no511_k18.b1 PHD_FILE: MSMg01no511_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:36 2005
         (601 letters)



>mm_chrX_90824831_90825830
          Length = 1000

 Score = 1116 bits (577), Expect = 0.0
 Identities = 595/601 (99%), Gaps = 1/601 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gctacacagagaaaccctgtctcgaaaacaaacaaacaaacaaaaaaatactgagctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gctacacagagaaaccctgtctcgaaaacaaacaaacaaacaaaaaaatacagagctgga 260

                                                                       
Query: 61  aaaagtcccttgatgaatctaccgtgtggggtgtcacacagaagaatcaaggatgtctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagtcccttgatgaatctaccgtgtggggtgtcacacagaagaatcaaggatgtctaa 320

                                                                       
Query: 121 gaaagtatggggtagatgactttgaaggcttccaatagcactaaacatccataactgtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagtatggggtagatgactttgaaggcttccaatagcactaaacatccataactgtca 380

                                                                       
Query: 181 ttgatacagctatgaaagcctacaggaaaactacaaaaaaaaacagtacttcggtttttt 240
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttgatacagctatgaaagcctacaggaaaactacaaaaaaaa-cagtacttcggtttttt 439

                                                                       
Query: 241 aagaatattaaatatagggaaaacctaaaattcgacctaaggattaaagcaaagatacac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagaatattaaatatagggaaaacctaaaattcgacctaaggattaaagcaaagatacac 499

                                                                       
Query: 301 aggcaggtagcattagccccaacatggaacttgtactacagataacctagagaggaaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggcaggtagcattagccccaacatggaacttgtactacagataacctagagaggaaata 559

                                                                       
Query: 361 taattaaaagagaaatagctgaaggggtcaggagaaattggttttaaaagagactcaaca 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 560 taattaaaagagaaatagctgaaggggtcaggagaaataggttttaaaagagactcaaca 619

                                                                       
Query: 421 ggaaaaagaaacctgatttaaaaataagtaatcagtgctgtggagatggctcagtggtta 480
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaaaaagaaacctgttttaaaaataagtaatcagtgctgtggagatggctcagtggtta 679

                                                                       
Query: 481 agagcactgctgctcttccagaggacccaggttcaattcccagcactcacatggcagctc 540
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaagcactgctgctcttccagaggacccaggttcaattcccagcactcacatggcagctc 739

                                                                       
Query: 541 acaactatctgtaactcctgttccaggggatccaacaccctcagacagacatacatgcag 600
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 740 acaactatctgtaactcctgttccaggggatccaacaccctcagacagacatacattcag 799

            
Query: 601 t 601
           |
Sbjct: 800 t 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1000
Length adjustment: 10
Effective length of query: 591
Effective length of database: 990
Effective search space:   585090
Effective search space used:   585090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)