XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTTTATTAGAAATGACAATGGAAATCACCCCATCTTATTTTTTCTACTTC
ATAGAGCCTAGAGAAAAAGGAAATCAAGTACTAATAACTAGGGACCTATC
CTCTAGATCTATTGTTGAATATTTCCCTCTATGTGGGATTTTGAAAAATA
AGGACCAAATTAGAAGGAAATTAGAATATATTTGTAAAGACTTTTTATTA
ATTACAATAAGACATAATTGAACAGCACATCTTATTTGTCAAAAATCCAA
TACTATGTTTGTGAATTTGAAAACTGTATAAAATAAAAACTATTTTTAAT
AACATTATTTTTGAGAAAACTGAGACATACAGTAGTTGAGAAAATCGTCT
AAAGTGATATCTTCAGTAAGGAGCCATGGAAAGACCTGAACATAAGGAAT
AGACGGTCATAACTTATGCTATTAAGCAAAATAGTATATTTTGAGTTGTT
TTTGTCTTGCTTTTACAGATTAAAGATCCACAAAAAGAGGAAAAGCTTAA
GTAGCTTTGGGTAGGTACTGCTGACCCATGTTGGCTACATTGGGACTCTG
TCATCATCAAAGACTTACAGATCATGTTTATAGCAGCCCCCACGAGTCAT
GAGCNAAACCTAAAGTAGTTGTTCCTTAGTGGAGGACCATCATGCAGGAT
ACCCTGACTTCANGCTTCAGCCTAGCATAGNCAACAGCATATATATCAAA
TAACTTTTATAGCTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTCTACCCCATTTTTTTTTT
AAATAAGGTTATTTGGTTCTTTGGAGTCTAACTTCTTGAATTCTTTGTAT
ACATTGGATATTAACCCTCTATGGGATGTAGGATTGGTAAAGATTTTATC
CTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCCCTTTTATGAGGTC
CCATTTGTTGATTCTTGATCTTACAGCATAAGCCATTGATGTCCTATTCA
GGAATTTTCTCCCTGTGCCCATGTGTTTGAGGATCTTGCCCACGTTCTCC
TCTATAAGCTTCAGTCTATCTGGCTTTATGCAGGGTCCTTTATCCACTTA
GACTTGAGCTTTGTACAAGGAGATAAGAATGGATCAATATTCATTTTTCT
ACATGCTGACCACCAGTTGAACCAGCACCATTTGTTAAAAATGCTGTCTT
TTTTCCACTGGATGGTTTTTGCTCCTTTGTTAAAGATCAAGTGGCCATAG
GTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATCCCAATGATCTTCCTG
CATGTCTCTGTACCAATACCATGGCATTTTTTGTTTTTTGTTTTTTAACA
CTATTACACTATTGCTCTCTAATACAGCTGAGATCTGTGATGGTGATTTC
CCCAAAGTTCTTTTATTATTGAAGTAGTTTTGCTATCTTAGGTTTTTTG

Query= MSMg01no512_h21.b1 MSMg01no512_h21.b1 CHROMAT_FILE:
MSMg01no512_h21.b1 PHD_FILE: MSMg01no512_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:40 2005
         (569 letters)



>mm_chrX_143763535_143764503
          Length = 969

 Score = 1023 bits (529), Expect = 0.0
 Identities = 556/565 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctttattagaaatgacaatggaaatcaccccatcttattttttctacttcatag 64
           |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttaaaagaaatgacaatgaaaatcaccccatcttattttttctacttcatag 264

                                                                       
Query: 65  agcctagagaaaaaggaaatcaagtactaataactagggacctatcctctagatctattg 124
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 agcctagagaaaaaggaaatcaagtactactaactagggacctatcctctagatctattg 324

                                                                       
Query: 125 ttgaatatttccctctatgtgggattttgaaaaataaggaccaaattagaaggaaattag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 325 ttgaatatttccctctatgtgggattttgaaaaataaggaccaaattagaaggaaattaa 384

                                                                       
Query: 185 aatatatttgtaaagactttttattaattacaataagacataattgaacagcacatctta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatatatttgtaaagactttttattaattacaataagacataattgaacagcacatctta 444

                                                                       
Query: 245 tttgtcaaaaatccaatactatgtttgtgaatttgaaaactgtataaaataaaaactatt 304
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 445 tttgtcaaaaatccaatactatatttgtgaatttgaaaactgtataaaataaaaactact 504

                                                                       
Query: 305 tttaataacattatttttgagaaaactgagacatacagtagttgagaaaatcgtctaaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaataacattatttttgagaaaactgagacatacagtagttgagaaaatcgtctaaag 564

                                                                       
Query: 365 tgatatcttcagtaaggagccatggaaagacctgaacataaggaatagacggtcataact 424
           ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 565 tgatatcttcagtaaggagccatggaaagacctaaacataaggaatagatggtcataact 624

                                                                       
Query: 425 tatgctattaagcaaaatagtatattttgagttgtttttgtcttgcttttacagattaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tatgctattaagcaaaatagtatattttgagttgtttttgtcttgcttttacagattaaa 684

                                                                       
Query: 485 gatccacaaaaagaggaaaagcttaagtagctttgggtaggtactgctgacccatgttgg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatccacaaaaagaggaaaagcttaagtagctttgggtaggtactgctgacccatgttgg 744

                                    
Query: 545 ctacattgggactctgtcatcatca 569
           |||||||||||||||||||||||||
Sbjct: 745 ctacattgggactctgtcatcatca 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)