XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACCT
GTGCTCTTCTAACATCTTTTACAAATTTCCTACAGAGTTTAGTTTTAGTT
CATTTCTCCATTGCTATTACAGAATACCTGAAATTGGACTGTTTATAAAG
GAAAAAGATCAGCTTATTGTTCTAGCATCTGGAAACCCAAGATTGGATAT
ACTCTCAACAAAGATTTTGTAATGAGTTAAAACATGGAAGACAGGTAGAG
AAACAAGGAACTACATATGAAAGAGATAAAACAGAAGGAGTTACATTGAA
TTATCGCAAGCAGGTCCTATTCCTAATTCAACTCTTCAAGAAAAAGGACT
TACTATGCAACAAAATCATGTATGACATAATGGCCTATTCTTACCTCTCC
CAACATTGTTACTTGTAATAAAACCTAAAATTTACATGGTTTTGAACATC
CAAACTACATCCAAACTATAATAACTTATAAATCACAGACCTAATTCTCA
GCTTCTTATGCTCCATTGGTGCCACTGCGCAGGCGCTAGCCCGAATCTGG
CGCCAACCCCACCCAAGCAGGTGCATACAAATTAAAGTGCCAGCAGACTG
ACCAATCCCAGGAGGACACATAGCTCTCCTCAGTGCTGGGGTGTATATAA
GCAGTCCTCCCTGGGTTCCCGGGGTCCCCTTAGCATCGAGGTGTTCCTGA
AATATAGAAGACTGTTGAGAAAGATCCGACCGTGTTGCGTTTTTCTTGAT
GGACGAAGT

ATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCAGCTAAGGAATACTGATTGGCTGAGAAGCACC
TAAAAAAAAAACTGTTCAACATCCGTAATCATCCGGGAAATGCAAACCAA
AACAACCCTGAGAGTGCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ACTCAGGTGAAAGCAGATGCTGGTGAGGATATGGAGCAAAAGGAACACTC
CTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCTGT
CTGGTGGTTCCTCAGAAAGTTGGACATTGTTTTACCAGATCAAGCAATAC
CACTCCTGGGCATATACCCAGATGTTCCAACTTGTAAAAAAGACACATGC
TCCATTATGTTCATAGAAGACTTATTTATAATAGCAGAATTTGGGAAGAA
GCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTA
CACAGTGGAATACTACTTAGCTATTAAAAACAATGACTTTATGAAATTCC
TAGGCAAATGGATGGTCCTGGAGGATATCATCCTAAATGAGGTAACCCAA
TCACAAAAGAACACACGTGGTATGCACTCACTGATAAGTGCCTATTTTCC
CAGAAGTTTAGAATACCCAAGATAAAATTTGTAAACACATGAGACTGAAN
GAGAAGGAGAACAAAGNGGGNATACTTTGATCCTTCTTATAAAGGGGAAC
AATTTACCATGGGAGGAGT

Query= MSMg01no512_l18.b1 MSMg01no512_l18.b1 CHROMAT_FILE:
MSMg01no512_l18.b1 PHD_FILE: MSMg01no512_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:00 2005
         (630 letters)



>mm_chrX_14767865_14768894
          Length = 1030

 Score = 1197 bits (619), Expect = 0.0
 Identities = 625/627 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacctgtgctcttctaacatcttttacaaatttcctacagagtttagttttagt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacctgtgctcttctaacatcttttacaaatttcctacagagtttagttttagt 263

                                                                       
Query: 64  tcatttctccattgctattacagaatacctgaaattggactgtttataaaggaaaaagat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcatttctccattgctattacagaatacctgaaattggactgtttataaaggaaaaagat 323

                                                                       
Query: 124 cagcttattgttctagcatctggaaacccaagattggatatactctcaacaaagattttg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagcttattgttctagcatctggaaacccaagattggatatactctcaacaaagattttg 383

                                                                       
Query: 184 taatgagttaaaacatggaagacaggtagagaaacaaggaactacatatgaaagagataa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatgagttaaaacatggaagacaggtagagaaacaaggaactacatatgaaagagataa 443

                                                                       
Query: 244 aacagaaggagttacattgaattatcgcaagcaggtcctattcctaattcaactcttcaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacagaaggagttacattgaattatcgcaagcaggtcctattcctaattcaactcttcaa 503

                                                                       
Query: 304 gaaaaaggacttactatgcaacaaaatcatgtatgacataatggcctattcttacctctc 363
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaaaaggacttactatgcaagaaaatcatgtatgacataatggcctattcttacctctc 563

                                                                       
Query: 364 ccaacattgttacttgtaataaaacctaaaatttacatggttttgaacatccaaactaca 423
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaacattgttacttataataaaacctaaaatttacatggttttgaacatccaaactaca 623

                                                                       
Query: 424 tccaaactataataacttataaatcacagacctaattctcagcttcttatgctccattgg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccaaactataataacttataaatcacagacctaattctcagcttcttatgctccattgg 683

                                                                       
Query: 484 tgccactgcgcaggcgctagcccgaatctggcgccaaccccacccaagcaggtgcataca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgccactgcgcaggcgctagcccgaatctggcgccaaccccacccaagcaggtgcataca 743

                                                                       
Query: 544 aattaaagtgccagcagactgaccaatcccaggaggacacatagctctcctcagtgctgg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aattaaagtgccagcagactgaccaatcccaggaggacacatagctctcctcagtgctgg 803

                                      
Query: 604 ggtgtatataagcagtcctccctgggt 630
           |||||||||||||||||||||||||||
Sbjct: 804 ggtgtatataagcagtcctccctgggt 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)