NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATCATGTTCGAGGCTGTGTTTGATTCTTAGCATTCAAAGAAA
AAGAAACTGTTGCTTACATCCCAATGTTAACATTTCATTTCCATGAGAGT
TTTATGTGTTGGGTACTTGTTTGGTTTTGAGACAGGCCTTGCTTTATAGC
CTACACTATCCTTGAACTTACATATACCCCAGGCTGACCTCTCATTTGTG
ATCTTTTATCTTCTATTTCCCCAATGGTGATATTAGTTCTTTTGAAAAAT
ATTAATTATTAAGTATGTATATTTTATTTGAAACTCTATGATTGTCATAG
TAGAAAAAAATTAAAGGAACATTTTATTGTTATTTTTACCATTTGAATAT
TGTGCTTCATGGTTTCCCTTCTACCTTTTTTGTTCATTTCCATTGTTAAA
GGTGACACTTCATCTGAGCCAACAGCTGGACCAGTTCTACATTCAGATAC
TTCAAGTCATCCCACTGTAGCCTATTCTTCAAACCAGACAACTAGCTTTC
AGGTATTTTCTAGTATCCTACAAGCTTACATAAGTGTTCCAGAACAAATA
CATTCTTCTTACCAACTACTAGGATATTGCTAGCAAATTTCAGGGGTGAG
AGAATTGCTACTATATATATATATATGTGTTGTATATACTGTATATGTAC
TGATATCTTATATATAAATATATGTGTATGTATTATATTGTGAATTGGAG
GATTTATCTGGTTTCTTTTATTTACC

NNAACAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCTGAGAAGCACCTGAAAAAATGTTTAACATCCTTAATCATCAGGGAAAA
GCAAATAAAAACAAACCCTGAGAATTCCACCTCACACCAGTCAGAATGGC
TAAGATCAAAAATTCATGTGACAGCAGATGCTGGTGAGGATGTGGAGAAA
GAGGAACACTCCTCTATTGTTGGTGGGATTGCAAGCTTGCACAACCACTC
TGGAAGTCAGTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGA
GGATCCAGCAACACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCG
GTAAGAAGGACACATGCTCCACTATATTCACAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCCAGAAGCCCCTCAACAGAGATATGGGTACA
GAAAATGTGGTACATTTACAGAATGGAGTACTACTCCACTATTAAAAAGA
ATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACCCAATCACAAAGGAACTCACGCAATATGTACTCACT
GATAAGTGGATATTAGCCCAGAAACTTCAGATACCCAAGATATAAGATAC
AATTTGTTATATGCATGAAACTCAAGAAGAATGAAGACCAAAGTGTGGAC
ACTTTGCCCCTTCTTAGAN

Query= MSMg01no515_l12.b1 MSMg01no515_l12.b1 CHROMAT_FILE:
MSMg01no515_l12.b1 PHD_FILE: MSMg01no515_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:09 2005
         (634 letters)



>mm_chrX_147670474_147671507
          Length = 1034

 Score = 1191 bits (616), Expect = 0.0
 Identities = 622/624 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatcatgttcgaggctgtgtttgattcttagcattcaaagaaaaagaaactgttg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatgttcgaggctgtgtttgattcttagcattcaaagaaaaagaaactgttg 264

                                                                       
Query: 65  cttacatcccaatgttaacatttcatttccatgagagttttatgtgttgggtacttgttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttacatcccaatgttaacatttcatttccatgagagttttatgtgttgggtacttgttt 324

                                                                       
Query: 125 ggttttgagacaggccttgctttatagcctacactatccttgaacttacatataccccag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggttttgagacaggccttgctttatagcctacactatccttgaacttacatataccccag 384

                                                                       
Query: 185 gctgacctctcatttgtgatcttttatcttctatttccccaatggtgatattagttcttt 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgacctctgatttgtgatcttttatcttctatttccccaatggtgatattagttcttt 444

                                                                       
Query: 245 tgaaaaatattaattattaagtatgtatattttatttgaaactctatgattgtcatagta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaaaaatattaattattaagtatgtatattttatttgaaactctatgattgtcatagta 504

                                                                       
Query: 305 gaaaaaaattaaaggaacattttattgttatttttaccatttgaatattgtgcttcatgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaaaaaattaaaggaacattttattgttatttttaccatttgaatattgtgcttcatgg 564

                                                                       
Query: 365 tttcccttctaccttttttgttcatttccattgttaaaggtgacacttcatctgagccaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttcccttctaccttttttgttcatttccattgttaaaggtgacacttcatctgagccaa 624

                                                                       
Query: 425 cagctggaccagttctacattcagatacttcaagtcatcccactgtagcctattcttcaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagctggaccagttctacattcagatacttcaagtcatcccactgtagcctattcttcaa 684

                                                                       
Query: 485 accagacaactagctttcaggtattttctagtatcctacaagcttacataagtgttccag 544
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 accagacaactagctctcaggtattttctagtatcctacaagcttacataagtgttccag 744

                                                                       
Query: 545 aacaaatacattcttcttaccaactactaggatattgctagcaaatttcaggggtgagag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aacaaatacattcttcttaccaactactaggatattgctagcaaatttcaggggtgagag 804

                                   
Query: 605 aattgctactatatatatatatat 628
           ||||||||||||||||||||||||
Sbjct: 805 aattgctactatatatatatatat 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)