Query= MSMg01no515_o24.b1 MSMg01no515_o24.b1 CHROMAT_FILE:
MSMg01no515_o24.b1 PHD_FILE: MSMg01no515_o24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:28 2005
(353 letters)
>mm_chrX_96166635_96167387
Length = 753
Score = 603 bits (312), Expect = e-177
Identities = 339/350 (96%), Gaps = 5/350 (1%)
Strand = Plus / Plus
Query: 5 gaattctgggatttt---tatatgtatcaccacactctgtccacagtgttttttacacac 61
||||||||||| || |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 gaattctggga--ttgcatatatgtatcaccacactctgtccccagtgttttttacacac 261
Query: 62 aatataatgtcatctgcaaatagttatatgttcacattcttttctaatatggatttcttt 121
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatataatatcatctgcaaatagttatatgttcacattcttttctaatatggatttcttt 321
Query: 122 cacttctttttcctatagaaatgatgaaaacatattttgtctttagtcttgtcttaggaa 181
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacttctttttcttatagaaatgatgaaaacatattttgtctttagtcttgtcttaggaa 381
Query: 182 aaatttttctgtcagataattcattgaaagcttctaacagattggataagctctcttcta 241
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaaatttctgtcagataattcatcgaaagcttctaacagattggataagctctcttcta 441
Query: 242 ttcttagtttggtggacttgtgaaaaagtaatgaacaggattttataattggagacaatt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttcttagtttggtggacttgtgaaaaagtaatgaacaggattttataattggagacaatt 501
Query: 302 aggtgttttctgttctatcatatctattacatcagtggcttttttttttg 351
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aggtgttttctgttctatcatatctattacatcagtggcttttttttttg 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_o24.g1 MSMg01no515_o24.g1 CHROMAT_FILE:
MSMg01no515_o24.g1 PHD_FILE: MSMg01no515_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:28 2005
(578 letters)
>mm_chrX_96335291_96336268
Length = 978
Score = 1064 bits (550), Expect = 0.0
Identities = 571/578 (98%)
Strand = Plus / Minus
Query: 1 ctgtcccctgcagcaggatggtatggaaagaatggcacacggcacagttgtgcctctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ctgtcccctgcagcaggatggtatggaaagaatggcacacggcacagttgtgcctctgcc 910
Query: 61 cgactcaacaagtaaccggctgaccttagacaagacatttcccctttctgcacatatgcc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cgactcaataagtaaccggctgaccttagacaagacatttcccctttctgcacatatgcc 850
Query: 121 tcctcctctggaaaatggggccattgcctacttcccagggctgttgggagcacccgatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tcctcctctggaaaatggggccattgcctacttcccagggctgttgggagcacccgatga 790
Query: 181 gatcatatatgagaatgcattgtaagtagcgaggtactacctgcctattacttagcatgc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 789 gatcatatatgagaatgcattgtaagtagcaaggtactacctgcctattacttagcatgc 730
Query: 241 caagcacggtatcatttagaagtagcaagctgagaatgagtatgcttctggcttgctggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 caagcacggtatcatttagaagtagcaagctgagaatgagtatgcttctggcttgctggc 670
Query: 301 accctgaccccaaccaccaccaccaccagatcataccgggaacaacgcactttcatagtc 360
||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||||
Sbjct: 669 accctgaccccaaccaccaccaccaccagatcataccaggaagaagggactttcatagtc 610
Query: 361 tcagaagacccccacttcacatgcccttataatcatgtgaactatcccccaaacctgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcagaagacccccacttcacatgcccttataatcatgtgaactatcccccaaacctgttg 550
Query: 421 ttcccatgacaaccagcagtctccttgttggcccagtgaccccatacatagccctaaccc 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttcccatgacaatcagcagtctccttgttggcccagtgaccccatacatagccctaaccc 490
Query: 481 cagaaatcagtgcttcccagcaagcaggatccaaggcctgggcaccctcatgcacctaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 cagaaatcagtgcttcccagcaagcaggatccaaggcctgggcaccctcatgcacctaag 430
Query: 541 ctagtatggcaagtgagggctccaagagccccaaagaa 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctagtatggcaagtgagggctccaagagccccaaagaa 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
