NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCAACTGAGAAATATTGAATGGCTGAGTAGCACCTAAAGAA
ATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCATTCAGAATGGCTAAGATCAAAAACTCAGGGGAC
AGTAGAGGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTCCTG
GTGGGACTGCAAGTTGGTACAACTACTCTGGAAATCAGTTTGGTGGTTCC
TCAGAAAATGGGACATAGTTCTACCAGAAGATCCAGCAATACCACTCCTG
GGCATATCATATCTACCAGAAGATGTTCCAGCATGTAATAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG
AACCCAGATGTCCCTCAACAGAGGAATGCATACAGATAATGTGGTTTATT
TATACAATGAAGTACTACGCAGCTGTTTAAAACAACAAATTTAGGAGGTT
CTTCGACAAATGGATGGATCTGAAAGATATCATCCTAAGTGAGGTAACCC
AATCACAAAAGAACACACATGATATGCACTCACTTATAAGTGGATTTTAG
CTCAGAAGCTCAGAATTCTTCTTAGAAGGGGGAACAAAATGCTCATGGAA
GGATTTACAGAGACAAATTTTGGAGCAGAGACTGAAGGAATGACCATCCA
GAGACTGCCCCACCT

NAACGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTATTGGAGCCTCTTTTGAAGCCA
CATTACTCATATCCATCAAAAATATTTTTAAATAAGGAAAACATCTTGAG
TATGCTCAATTATTTGAGGGCAATCTGTTCTAAATGAAATAATATGACAT
TTTAGTAACTCACTTCCCTCCAAAATAAAGACCTTATGTGAGCTCAGAAA
TGCTTTCAAAATGCTCAGAAAAGTCTACGTCACAATCCCAAATGATAATT
AAGGCCTGTGCTTGGGTGTGATTAAGGGTCCGGTACAAGGCCTCAGACAA
CACAGTGCTCTTGCCTCCTGGCTAAAAGAACGAGGAAGCTGCAGTGACCA
CTTTGGCTGCATGAGCACAGAACTCCCAAATGCACATCAGACGAAGCAAC
CTTTTAAGTTACTTTCTCAGTTACCATAAAACACTTTATAAACTTCTCTA
CTCAAGTCCCTTTGTGCTTTGCAGGCTGGTAGACTGGACTGTGTAAAATT
CATCCCTTTTTGGCAAAGGCATCCCTAAGGGCAGTGAGCATGCTCTTTAG
TGATAGATTAGTATGCAAGTTATAATGTGTGGAACTAGGAGAAACCCATA
GCTCTTTTCTTTAAACACATATCCATACTGCTATGTTGCAATTTTCAATA
TCAAATTTTTCAAAAGGCTGTCTATATTTTAAGGCTATCACACTCAGCAG
AAGTCCTGATTAN

Query= MSMg01no516_e04.g1 MSMg01no516_e04.g1 CHROMAT_FILE:
MSMg01no516_e04.g1 PHD_FILE: MSMg01no516_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:55 2005
         (686 letters)



>mm_chrX_22621988_22623073
          Length = 1086

 Score = 1286 bits (665), Expect = 0.0
 Identities = 680/685 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattggagcctcttttgaagccacattactcatatccatcaaaaatatttttaaataagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattggagcctcttttgaagccacattactcatatccatcaaaaatatttttaaataagg 260

                                                                       
Query: 61  aaaacatcttgagtatgctcaattatttgagggcaatctgttctaaatgaaataatatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacatcttgagtatgctcaattatttgagggcaatctgttctaaatgaaataatatga 320

                                                                       
Query: 121 cattttagtaactcacttccctccaaaataaagaccttatgtgagctcagaaatgctttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattttagtaactcacttccctccaaaataaagaccttatgtgagctcagaaatgctttc 380

                                                                       
Query: 181 aaaatgctcagaaaagtctacgtcacaatcccaaatgataattaaggcctgtgcttgggt 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatgctcagaaaagtctacatcacaatcccaaatgataattaaggcctgtgcttgggt 440

                                                                       
Query: 241 gtgattaagggtccggtacaaggcctcagacaacacagtgctcttgcctcctggctaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgattaagggtccggtacaaggcctcagacaacacagtgctcttgcctcctggctaaaa 500

                                                                       
Query: 301 gaacgaggaagctgcagtgaccactttggctgcatgagcacagaactcccaaatgcacat 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacgaggaagcagcagtgaccactttggctgcatgagcacagaactcccaaatgcacat 560

                                                                       
Query: 361 cagacgaagcaaccttttaagttactttctcagttaccataaaacactttataaacttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagacgaagcaaccttttaagttactttctcagttaccataaaacactttataaacttct 620

                                                                       
Query: 421 ctactcaagtccctttgtgctttgcaggctggtagactggactgtgtaaaattcatccct 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 ctactcaagtccctttgtgctttgcaggctggtagactggactgtgtaaaatgcatccct 680

                                                                       
Query: 481 ttttggcaaaggcatccctaagggcagtgagcatgctctttagtgatagattagtatgca 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 ttttggcaaaggcatccctaagggcagtgagcatgctctttagtgatagattagtaagca 740

                                                                       
Query: 541 agttataatgtgtggaactaggagaaacccatagctcttttctttaaacacatatccata 600
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 agttataatgtgtggaactaggagaagcccatagctcttttctttaaacacatatccata 800

                                                                       
Query: 601 ctgctatgttgcaattttcaatatcaaatttttcaaaaggctgtctatattttaaggcta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgctatgttgcaattttcaatatcaaatttttcaaaaggctgtctatattttaaggcta 860

                                    
Query: 661 tcacactcagcagaagtcctgatta 685
           |||||||||||||||||||||||||
Sbjct: 861 tcacactcagcagaagtcctgatta 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)