Query= MSMg01no518_f06.b1 MSMg01no518_f06.b1 CHROMAT_FILE:
MSMg01no518_f06.b1 PHD_FILE: MSMg01no518_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:42 2005
(616 letters)
>mm_chrX_16284010_16285025
Length = 1016
Score = 1152 bits (596), Expect = 0.0
Identities = 608/612 (99%)
Strand = Plus / Plus
Query: 5 gaattctgcatagctgttcaaggatccccagtatctcagagtagcagccatttgaacatc 64
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 205 gaattctgcatagctgttcaaggatccccagtatctcaaagtagcagccatttgaaaatc 264
Query: 65 atagccttggaactgtcctctacatttttgggggtgttctactcttgctccccagaatac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atagccttggaactgtcctctacatttttgggggtgttctactcttgctccccagaatac 324
Query: 125 ttccagggtcaattatctgcataacagtccttgtcagagagttggtggtgccatgagcag 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccagggtcaactatctgcataacagtccttgtcagagagttggtggtgccatgagcag 384
Query: 185 caaaggaaggcaaccattccttcaagatacttttctttagtcatggagcttctgtgatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaaggaaggcaaccattccttcaagatacttttctttagtcatggagcttctgtgatca 444
Query: 245 aggaaatatgtcttcctctttctgttggttaatgaatgcttaatacaacaaactgtttct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggaaatatgtcttcctctttctgttggttaatgaatgcttaatacaacaaactgtttct 504
Query: 305 ctctattccagatcatttttgatatcttctttctatgtcagtatagttgagcacctgaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctattccagatcatttttgatatcttctttctatgtcagtatagttgagcacctgaca 564
Query: 365 gaggatggaagcagtggttctctctacctttctatatattcaaaacaatattctcagcct 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 565 gaggatggaagcagtggttctctctacctttctatatattcaaaacaatattctcagctt 624
Query: 425 ttggctacatcttcccaaagaagggttggggaaatgtccactccctaccaccctgctatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttggctacatcttcccaaagaagggttggggaaatgtccactccctaccaccctgctatg 684
Query: 485 ggaaactccccatgagctcaggcagttggcttatctaaatccccacccaatcactctaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggaaactccccatgagctcaggcagttggcttatctaaatccccacccaatcactctaat 744
Query: 545 gcacacccccagttgaaaagcacaacataatgcatcaatgtatccaagaaagcagctatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcacacccccagttgaaaagcacaacataatgcatcaatgtatccaagaaagcagctatt 804
Query: 605 agtgctacctca 616
||||||||||||
Sbjct: 805 agtgctacctca 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_f06.g1 MSMg01no518_f06.g1 CHROMAT_FILE:
MSMg01no518_f06.g1 PHD_FILE: MSMg01no518_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:42 2005
(586 letters)
>mm_chrX_16409872_16410858
Length = 987
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 1 actctgtatttcaggaaggccttccacttgcttcctctcacctcagatgcccaagaagtt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 783 actctgtatttcaggaaggccttccacttgctccctctcacctcagatgcccaagaagtt 724
Query: 61 ggaacacagtcgtgtgctatacatggctatacattacaaagcaagattatgtaaggtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ggaacacagtcgtgtgctatacatggctatacattacaaagcaagattatgtaaggtttc 664
Query: 121 acatatgatagaatattaacctctgggggtatgcaattgggtggtattttgtacatcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acatatgatagaatattaacctctgggggtatgcaattgggtggtattttgtacatcaca 604
Query: 181 ctgaagggaaaaacacatatccattgagagaagaaactcccattctttccaccttctgga 240
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 603 ctgaagggaaaaacccatatccattgagagatgaaactcccattctttccaccttctgga 544
Query: 241 cgtctgtaaaacccctctttgatttctgttttcatggattcacctatttttagatattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgtctgtaaaacccctctttgatttctgttttcatggattcacctatttttagatattat 484
Query: 301 aatttttatagtagccgtgtgcttttgtatctttttatatctgattattttcacataata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aatttttatagtagccgtgtgcttttgtatctttttatatctgattattttcacataata 424
Query: 361 taatgtgatgtttctcata-ttttttccagattttgatttcaagggcaatattgtattag 419
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taatgtgatgtttctcatatttttttccagattttgatttcaagggcaatattgtattag 364
Query: 420 gagaactttcaagacttattttggtaggatgtggtgtccctgaaagtggaaatctgtatc 479
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 363 gagaactttcaagacttattttggcaggatgtggtgtccctgaaagtggaaatctgtatc 304
Query: 480 tgatgaccacttaacaccatcttgagtaaaaaattatattttactgaaaatctcttttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgatgaccacttaacaccatcttgagtaaaaaattatattttactgaaaatctcttttga 244
Query: 540 ctgatactcatcatttagacttctgaaaatttcaactttcatt 582
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctgatactcatcatttagacttctgaaaatttcaactttcatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space: 562752
Effective search space used: 562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
