TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGG
AATTCTTTATTTATCTCTCAGCCCATTTTTTAATGGGGTTATTTGATTTT
CTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGACATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGAGCCTTTCCCAATCTGTTGGTGACCTTT
TTGTCTCATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTTATG
AGGTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTCT
ATTCAGGAATTTTTCCCTTGTGCCCATATCTTCGAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTTGATC
CACTTAGATTTGACCTTAGTACAAGGAGATAAGAATGGATCAATTCACAT
TATTCTACATGATATCCGCCAGTTGTGCCAGCGCCATTTGTTGAAAATGC
TGTCTTTTTTCCACTGGATGGTTTTAGCTCACTTGTCAAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCATTTCTATTCCATTGGCA
CATCATCAGACATTTCTTAGAGACACAGAGTCAGATCCAACCCTCATTCC
TGAGTGGCAATCTATACTTTGGCATGCTACCCAGGGGAGCCCTATTATAG
ATGGAAAAGCATCAAGTCCTAAAAGTGCTGGTAAGATGGCCACTGTCATG
TTTTTTTTATN

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCGGTGCTCTTGATTTTTAGAATGAATTTG
TGATTTAAATAATGAAGCCAATGCATATGTTTGAGGCAAAGAACTAGAGA
TAGTCCAGTAGATAGTGTTTGTCTTGCAAACACTAGAACCTGAGTTAAGG
CTCCATGTGAGAAAAAAATGGCTGCAACACCCAGGAGTGTGGGCCCTGCC
CCTTGCCTTGGCTGTACAATAGAGCTGGCCCCTTGCTGTGGGGTTTACTG
GTGAGCATAGGAGAGCTGACCCTGCCACTTGGATTAGGCAAGGAAAGACT
GTTCCCCCAACCCCCAACTCTCCTCTTCTTGACCCTCATCCCCTGTGGCT
AGTGGTAGAGCTGGTCCTACCACTCACTGGCTTCAGCACTCAGATAGCAG
GCCCTGCACCTCGCCTGGGCAGAGCAATAGAGGTGACCCTGGTGGTGAAG
ATGCAGGGAAGCTGGCCCTGAGGGTGTAAGATCTAGAACAATTGGCTCTG
CCTTTGTCAGCTGTGGTGTTGGGTGAACTAGCCAGGGCAATGTTGGAGGG
CTTGTCCTGGTAGTGTAGTAGGGTGTAGGTGTGGGAGAGCTGTCAGGCTA
ACTAGCTCAGCTACCATCCAGTCCCAGATCCAGGACAAGATCTGAATTGA
ATTGGCCCACCACAACATCTACCCTGGCTATGACCTGCTGGAGTGCATGA
AGGGACCA

Query= MSMg01no518_p17.b1 MSMg01no518_p17.b1 CHROMAT_FILE:
MSMg01no518_p17.b1 PHD_FILE: MSMg01no518_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:34 2005
         (706 letters)



>mm_chrX_74630461_74631566
          Length = 1106

 Score = 1228 bits (635), Expect = 0.0
 Identities = 681/701 (97%), Gaps = 8/701 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctttatttatctctcagcccattttttaatggggttatttgattttctggagtcc 65
           ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattctttgtttggctctcagcccattttttaatggggttatttgattttctggagtcc 273

                                                                       
Query: 66  accttcttgagttctttatatatattggacattagtcccctatctgatttaggataggta 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 accttcttgagttctttatatatattggacattagtcccctatctgatttaggataggta 333

                                                                       
Query: 126 aagagcctttcccaatctgttggtgacctttttgtctcattgacagtgtcttttgcctta 185
           |||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 334 aagatcctttcccaatctgttggtggcctttttgtctcattgacggtgtcttttgcctta 393

                                                                       
Query: 186 cagaagctttgcagttttatgaggtcccatttgtcaattcttgatcttacagcacaagcc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cagaagctttgcagttttatgaggtcccatttgtcaattcttgatcttacagcacaagcc 453

                                                                       
Query: 246 attgctgttctattcaggaatttttcccttgtgcccatatcttcgaggcttttccccact 305
           ||||||||||||||||||||||||||||||||||||        ||||||||||||||||
Sbjct: 454 attgctgttctattcaggaatttttcccttgtgccc--------gaggcttttccccact 505

                                                                       
Query: 306 ttctcctctataagtttcactgtctctggttttatgtggagttccttgatccacttagat 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttctcctctataagtttcactgtctctggttttatgtggagttccttgatccacttagat 565

                                                                       
Query: 366 ttgaccttagtacaaggagataagaatggatcaattcacattattctacatgatatccgc 425
           ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 566 ttgaccttagtacaaggagataagaatgggtcaattcacattcttctacatgatatccgc 625

                                                                       
Query: 426 cagttgtgccagcgccatttgttgaaaatgctgtcttttttccactggatggttttagct 485
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagttgtgccagcaccatttgttgaaaatgctgtcttttttccactggatggttttagct 685

                                                                       
Query: 486 cacttgtcaaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcatttcta 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cacttgtcaaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcatttcta 745

                                                                       
Query: 546 ttccattggcacatcatcagacatttcttagagacacagagtcagatccaaccctcattc 605
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 746 ttccattggcacatcatcagacatttcttagagacacagagtcagatccatccctcattc 805

                                                                       
Query: 606 ctgagtggcaatctatactttggcatgctacccaggggagccctattatagatggaaaag 665
           ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 806 ctgagtggcaatctatactttggcatgctccccaggggagccccattatagatggaaaag 865

                                                    
Query: 666 catcaagtcctaaaagtgctggtaagatggccactgtcatg 706
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 catcaagtcctaaaagtgctggtaagatggccactgtcatg 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)