XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CACCTGAGGAAACCAAACGGCTGAGAAACACCTGAAAAAATATTCACCAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCATCTC
ACACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGATAGCAGATGCTG
GCGAGGATGTGGAGAAAGAGGAACACTCCTCCACTGTTGGTGGGATTGCA
AGCTTGTACAACCACTCTAGAAATCAGTCTGGCGGTTTCTCAGAAAATTG
GACATGGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGCATATATCC
AGAAGATGTCCCAACCAGTAAGAAGGACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCA
ACAGAGGAATGGATACAAAAAATGTGGTACATTTACACAATGGAGTACTA
CTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGTTGG
ACCTGGAGGGCATTATCCTAAGTGAGGTAACCCAATCACAAAAGAACTCA
AATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGTATA
CCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAATGAAGACCA
AAGTGTGGACACTTTGCCCCTTCTAAGAATTGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCAGGACAAGGGTTACATGAACCTTGTCTCAAA
ACAAAAGGATTGGAGAGATGGCTCAGCATGTGCTCCTTTTGCAAAGGACC
CAAGTACACATTCCAGCATCCACATGACAGGTCACAAGTGTCTGTAATTT
CAGTTCCAGAGGATCCAGTGCAGTCTTCTGGCCTCCACAGGCACCAGGCA
TGTACTCAGTGCACATACATACACACGGACAAAACACTCACGTGCATAAA
ATAAAAACAAACCACTAAAAACCCCACAGATTTCAGCTCTGAGCAGACAA
GTCAGGCTACACAGCTGATGCTAACTTATAGTCTCCCACTGCCGCTGAGC
GGGTGAGCAGAGTAAAGCATCTGCCATATTTGGTGATAGGTCATTTGTGA
CTTTGACAAGTGCAGGTTCTGTAGAATGATGCAAAATGAGACTGGAGTCG
ATTGAAGAGGAAATGGAGGGTGACGAAGCACCAAGACATAGTTGGAAGAG
TTTGGCACAATTCAGAGCAGGTTCTTCATTTCTATTTTTATTTTTTTCTT
GAAACAGGGTCTCATGTTGCCTAGGCTGGTCTCAACCTTGATAAATAGTG
GAGGATGGCTTTGAACTCCTGATCCTCTTGTCTCTACCTCCCAAGCACTG
GGATTACAGCTCTGAACCAATGTGTCCAGCT

Query= MSMg01no519_a09.g1 MSMg01no519_a09.g1 CHROMAT_FILE:
MSMg01no519_a09.g1 PHD_FILE: MSMg01no519_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:37 2005
         (663 letters)



>mm_chrX_147534465_147535527
          Length = 1063

 Score = 1234 bits (638), Expect = 0.0
 Identities = 659/668 (98%), Gaps = 6/668 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggacaagggttacatgaaccttgtctcaaaacaaa----aggattggagagatggctc 56
           |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||
Sbjct: 197 caggacaagggttacatgaaccttgtctcaaaacaaacaaaaggattggagagatggctc 256

                                                                       
Query: 57  agcatgtgctccttttgcaaaggacccaagtacacattccagcatcc-acatgacaggtc 115
           ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 257 agcatgtgctccttttgcaaaggacccaagtacacattccagc-tcccacatgacaggtc 315

                                                                       
Query: 116 acaagtgtctgtaatttcagttccagaggatccagtgcagtcttctggcctccacaggca 175
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 316 acaagtgtctgtaatttcagttccagaggatccagtgtagtcttctggcctccacaggca 375

                                                                       
Query: 176 ccaggcatgtactcagtgcacatacatacacacggacaaaacactcacgtgcataaaata 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccaggcatgtactcagtgcacatacatacacacggacaaaacactcacgtgcataaaata 435

                                                                       
Query: 236 aaaacaaaccactaaaaaccccacagatttcagctctgagcagacaagtcaggctacaca 295
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 436 aaaacaaaccactaaaaaccccacaaatttcagctctgagcagacaagtcaggctacaca 495

                                                                       
Query: 296 gctgatgctaacttatagtctcccactgccgctgagcgggtgagcagagtaaagcatctg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctgatgctaacttatagtctcccactgccgctgagcgggtgagcagagtaaagcatctg 555

                                                                       
Query: 356 ccatatttggtgataggtcatttgtgactttgacaagtgcaggttctgtagaatgatgca 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccatatttggtgataggtcatttgtgactttgacaagtgcaggttctgtagaatgatgca 615

                                                                       
Query: 416 aaatgagactggagtcgattgaagaggaaatggagggtgacgaagcaccaagacatagtt 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaatgagactggagtcgattgaagaggaaatggagggtgacgaagcaccaagacatagtt 675

                                                                       
Query: 476 ggaagagtttggcacaattcagagcaggttcttcatttctatttttatttttttcttgaa 535
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 676 ggaagagtttggcacaattcagagcaggttctttatttctatttttatttttttcttgaa 735

                                                                       
Query: 536 acagggtctcatgttgcctaggctggtctcaaccttgataaatagtggaggatggctttg 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 acagggtctcatgttgcctaggctggtctcaaccttgataaatagtggaggatggctttg 795

                                                                       
Query: 596 aactcctgatcctcttgtctctacctcccaagcactgggattacagctctgaaccaatgt 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aactcctgatcctcttgtctctacctcccaagcactgggattacagctctgaaccaatgt 855

                   
Query: 656 gtccagct 663
           ||||||||
Sbjct: 856 gtccagct 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)