TAGTAATGXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGATCCGCGG
AATTCTTTCTTATTTCAACCCTGACCAAGTATCATTCAGCAGAAAGTTTT
TTAGTTTTCATGAGTATGTGGACTTTCTGTTGTTTTGGTTGTTATTAACA
TCTAGCCTTATCCTGATGTTATCTGATAGAATGCATGTGAGTATTCCCAT
TTTCTTGTATCAGTTGATGCTTTTGTTTTATGACCAATTATATTATCAGT
TTTGGGGAATGTTCCATGAGGAACTCAGAAGAATATATATTCTCTTGTTT
TGGCATGAAATGTTCTATTGATATCTATTAAATCCATTTGGGTCAAGACT
TCTGTTAGTTTTACTGTGTCTCTGTTATTTTCTTTTCTTCTTTTTTTTTT
TTTTTGTTAGGGATGACCTGTTTCTGCACCTTAGTGGTCTCGGCTAGAAG
ACTTGAAGACAGGCCAGCCCACAGATATAGGCATTTCTAATTTTATGTAC
TTGCAACTTGATCATACAGCATGCAAGAATGTGTTAGAGCCAAGGAGATT
TCAAAAAAATAATTGAAAACATAAACAAAGGCAATTAAGTACACAACTGT
GTTCAAAATTTATTATTGACGGGTACTTGAGATCAGTAGTTACAAATTCA
TTTGATGAACTTTTACCTTGGGTTTTTTTTTATACTACTCAAATCAGGCC
TATCAATTTGTATTCAAGTGATGTTGTTTTGCATGTGTGTTGACACTCAA
CATTCTCCTCTACAGAGA

GCATGCTAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAATTAGCACCACAGCAGCCTTAT
AAAAGGATGTTAAAACTTTGAGGTGAAGAAGGATGATTTTACATTAATGT
TTATTTTTGCCAAAAAATAGCTATAGACACATTTAATAAAAATAACTAGG
ATATGTAACTAACATTTGATTACCACCAATTACAATTGATACCAATAGAT
TACAGAAGTTTCTTCTACTTTCTGTTAAAGCCTTTTTTCTTCCCACCAGT
TAATTGGAATCTCACTTGATAGCACCTAACAAAGGCTTAGGTTCTCCTGT
GGCAAGTTTAAGGTGAGGTCTTAGCCAATTAACATATCCTGTAAGCTTTT
GGAAATAAAATTTTGAAGTAAATTTGTACCAATTTTCCAGTATGATTGAA
ACCCTAATTATTAAAAAAGATATTGCCTCTGAAACTTATGAAGCAACAAC
TATGCCCCAGAACTTTAAACTTCCCTTTAGAGACATTAGCTAATAAAATA
CTTTTCACTTAGGAAACAATATATACTGGAAGATTTAAACCTTTTGCTTT
TTGTATTGAAACTGATAATAAATTTTTTTTTTACATATTGTTAAGCTATG
TTAACCATACCCAGGGGCAAAATCCTTTAATGGTCACCAGTTCACTAGAA
GTAAACTCTTTACAAATTGAAAAAATTAAACTTTTAAATCTATAATAATT
TTATATGG

Query= MSMg01no520_e04.b1 MSMg01no520_e04.b1 CHROMAT_FILE:
MSMg01no520_e04.b1 PHD_FILE: MSMg01no520_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:15 2005
         (501 letters)



>mm_chrX_4923825_4924731
          Length = 907

 Score =  803 bits (415), Expect = 0.0
 Identities = 480/519 (92%), Gaps = 30/519 (5%)
 Strand = Plus / Plus

                                                                       
Query: 11  ggaattctttcttatttcaaccctgaccaagtatcattcagcagaaagttttttagtttt 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 191 ggaattctttcttatttcaaccctgaccaagtatcattcagcagaaagtttttcagtttt 250

                                                                       
Query: 71  catgagtatgtggactttctgttgttttggttgttattaacatctagccttatcctgatg 130
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 catgagtatgtggactttctgttgttttggttgttattgacatctagccttatcctgatg 310

                                                                       
Query: 131 ttatctgatagaatgcatgtgagtattcccattttcttgtatcagttgatgcttttgttt 190
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||
Sbjct: 311 ttatctgatagaatgcatgtgagtattcccattttcttgtatctgttgatgctt--gttt 368

                                                                       
Query: 191 tatgaccaattatattatcagttttggggaatgttccatgaggaactcagaagaatatat 250
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 369 tatgatcaattatattatcagttttggggaatgttccatgaggaactcagaagaatgtat 428

                                                                       
Query: 251 attctcttgttttggcatgaaatgttctattgatatctattaaatccatttgggtcaaga 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 attctcttgttttggcatgaaatgttctattgatatctattaaatccatttgggtcaaga 488

                                                                       
Query: 311 cttctgttagttttactgtgtctctgttattttctttt-cttctttttttttttttttgt 369
           ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |
Sbjct: 489 cttctgttagtttcactgtgtctctgttattttctttttctttttttttttttttttttt 548

                                                                       
Query: 370 t---------------------agggatgacctgtttctgcaccttag------tggtct 402
           |                     |||||||||||||||||| |||||||      ||||||
Sbjct: 549 ttttttttttttttttttttttagggatgacctgtttctgtaccttagcactggtggtct 608

                                                                       
Query: 403 cggctagaagacttgaagacaggccagcccacagatataggcatttctaattttatgtac 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cggctagaagacttgaagacaggccagcccacagatataggcatttctaattttatgtac 668

                                                  
Query: 463 ttgcaacttgatcatacagcatgcaagaatgtgttagag 501
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttgcaacttgatcatacagcatgcaagaatgtgttagag 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 907
Length adjustment: 10
Effective length of query: 491
Effective length of database: 897
Effective search space:   440427
Effective search space used:   440427
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)