Query= MSMg01no522_e16.b1 MSMg01no522_e16.b1 CHROMAT_FILE:
MSMg01no522_e16.b1 PHD_FILE: MSMg01no522_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:52 2005
(645 letters)
>mm_chrX_148502944_148503987
Length = 1044
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%), Gaps = 4/583 (0%)
Strand = Plus / Minus
Query: 65 tggttgctggtcattcatcggggttggttgcagtttattagtagttatgctcaaagacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 tggttgctggtcattcatcggggttggttgcagtttattagtagttatgctcaaagacaa 985
Query: 125 aacaagaagaaattgtactcagagatcgctctctctc-tccctgcccccatccttctttc 183
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 984 aacaagaagaaattgtactcagagatcgctctctctcttccc-gcccccatccttctttc 926
Query: 184 tcttctatacagtgat-gggggtgaaactgagggcataaaggatgggaaaaagaacacat 242
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 925 tcttctatacagtgatagggggtgaaactgagggcataaaggatgggataaagaacacat 866
Query: 243 aaagtagaaagttcagctacacccttcctaccagatgtccttgtccctctggacttcatg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 aaagtagaaagttcagctacacccttcctaccagatgtccttgtccctctggacttcatg 806
Query: 303 taatagtttggaaagcattgtagtctctctctgtcttaaaaacagactctgctagagtga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taatagtttggaaagcattgtagtctctctctgtcttaaaaacagactctgctagagtga 746
Query: 363 aatttggtttatacaatttgttagctcaaaagtgccatttttactgatatcttcttactt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatttggtttatacaatttgttagctcaaaagtgccatttttactgatatcttcttactt 686
Query: 423 tactcttgagctcacaaagccctttctcatcgccaacagctagaatcctctctattctta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tactcttgagctcacaaagccctttctcatcgccaacagctagaatcctctctattctta 626
Query: 483 aactcaactgagttctaccttctggggaaaaaaaaagaattttggcctctaagcagaaca 542
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 625 aactcaactgagttctaccttctgggg-aaaaaaaagaattttggcctctaagcagaaca 567
Query: 543 actttctcacacgagtcttttttcatgaatatggcactcaagtacacttacttacataac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 actttctcacacgagtcttttttcatgaatatggcactcaagtacacttacttacataac 507
Query: 603 attatttatacagcccagtcttctttaacacactagctgtggt 645
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 attatttatacagcccagtcttctttaacacactagctgtggt 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_e16.g1 MSMg01no522_e16.g1 CHROMAT_FILE:
MSMg01no522_e16.g1 PHD_FILE: MSMg01no522_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:52 2005
(594 letters)
>mm_chrX_148344479_148345475
Length = 997
Score = 1104 bits (571), Expect = 0.0
Identities = 589/597 (98%), Gaps = 5/597 (0%)
Strand = Plus / Plus
Query: 1 ttgagagatgaggagctagaagagagaagggagaaacgcaggaaacaattggctgaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagagatgaggagctagaagagagaagggagaaacgcaggaaacaattggctgaggaa 260
Query: 61 gaaacaaaaataatagacaaaggcaaagaagacaaggagaacagagatcagagtgcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacaaaaataatagacaaaggcaaagaagacaaggagaacagagatcagagtgcacag 320
Query: 121 gtgaggtgactccaaaagacttaagagatgcagcattttctatttattatgattttgccc 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gtgaggtgactccaaaagacttaagagatgcagcattttgtatttattatgattttgccc 380
Query: 181 tgctcatagtactaaactactagaaaattctagaacattacgttgaacatgaaagattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctcatagtactaaactactagaaaattctagaacattacgttgaacatgaaagattgt 440
Query: 241 tcatttccagattgactatttactcatctggtttttaggcaaaaagaaaaaaaagtcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatttccagattgactatttactcatctggtttttaggcaaaaagaaaaaaaagtcaaa 500
Query: 301 cccagaggtaaattatttctccactaccttactggggaaatgtgaaccttatacaatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccagaggtaaattatttctccactaccttactggggaaatgtgaaccttatacaatagt 560
Query: 361 cctactttgtaaactctttctgaggcctaaaggtagactctcactcagcccacattcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 cctactttgtaaactctttctgaggcctaaaggtagactctcactcagctcacattcttg 620
Query: 421 gttctcacttccatttcacagtggacttccagaaaattttcccacctgaactctattacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttctcacttccatttcacagtggacttccagaaaattttcccacctgaactctattacc 680
Query: 481 aaacaactaatgtatatacataaaagctaatagaaacacaaaaaagaatgaaggctgtag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacaactaatgtatatacataaaagctaatagaaacacaaaaaagaatgaaggctgtag 740
Query: 541 tatgtcccactcat----ctattaggatattgggtaatttttttttcttatttgcat 593
|||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 741 tatgtcccactcattcatctattaggatattgggtaatttttttct-ttatttgcat 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 997
Length adjustment: 10
Effective length of query: 584
Effective length of database: 987
Effective search space: 576408
Effective search space used: 576408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
