Query= MSMg01no523_l22.b1 MSMg01no523_l22.b1 CHROMAT_FILE:
MSMg01no523_l22.b1 PHD_FILE: MSMg01no523_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:45 2005
(656 letters)
>mm_chrX_54069480_54070535
Length = 1056
Score = 1218 bits (630), Expect = 0.0
Identities = 648/656 (98%), Gaps = 4/656 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttagcctttctttatcttgcaatggctctggttccctttcttttttcttttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcctttagcctttctttatcttgcaatggctctggttccctttcttttttcttttc 260
Query: 65 ttttctttc----tttttttttttttttcgagacaaggtttcttgtgtagccaggattgt 120
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ttttctttcttttttttttttttttttttgagacaaggtttcttgtgtagccaggattgt 320
Query: 121 cctggaactcactctgtagaccaggctggcctcgaactcagaaatatgcctgtctctgcc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 cctggaactcactctgtagaccaggctggcctcgaactcagaaatctgcctgtctctgcc 380
Query: 181 tcccaagtgctgggattaaaggcgtgcgccaccacgcccggctctggttccctttctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccaagtgctgggattaaaggcgtgcgccaccacgcccggctctggttccctttctgtc 440
Query: 241 tgcactgacttttgcttctgttcattctttcttctctctcaagttcctcttttatcacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcactgacttttgcttctgttcattctttcttctctctcaagttcctcttttatcacac 500
Query: 301 tggaactgtctaagacagatgttgtccaccagagacccttactcactctgtactgtttcc 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggaactgtcttagacagatgttgtccaccagagacccttactcactctgtactgtttcc 560
Query: 361 taattaatgtttgttgcttcttaaactgttcttaatggttcgtactctctcagggagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattaatgtttgttgcttcttaaactgttcttaatggttcgtactctctcagggagcca 620
Query: 421 caagatcaggtaaattaggaaaaatcagcctgcgatggaaactgtcagagaggtagggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagatcaggtaaattaggaaaaatcagcctgcgatggaaactgtcagagaggtagggtg 680
Query: 481 ctgtgtttggagtctttgcacaggtggtagataatagtcctgagctaaacccaaaccaag 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgtgtttggagtctttgcacaggtggtagataatagtcctgagctaaacccaaaccaaa 740
Query: 541 atacattgagggttgcattctgaaggctaatggggttcagtgtctggaccttcaacttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atacattgagggttgcattctgaaggctaatggggttcagtgtctggaccttcaacttcc 800
Query: 601 tcttttctccctgaagttagtgtttaaggacttatcctgaaggtaaggaaaatgga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcttttctccctgaagttagtgtttaaggacttatcctgaaggtaaggaaaatgga 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_l22.g1 MSMg01no523_l22.g1 CHROMAT_FILE:
MSMg01no523_l22.g1 PHD_FILE: MSMg01no523_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:46 2005
(634 letters)
>mm_chrX_54164238_54165271
Length = 1034
Score = 1197 bits (619), Expect = 0.0
Identities = 630/634 (99%)
Strand = Plus / Minus
Query: 1 atactcttatttgaaaagtgacacattattgaaatattttgctcattttttgagacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 atactcttatttgaaaagtgacacattattgaaatattttgctcattttttgagacaagg 896
Query: 61 tctcactatttaattcagacctaaaactaactaactatgtcacataggctaaccaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctcactatttaattcagacctaaaactaactaactatgtcacataggctaaccaaattc 836
Query: 121 ataacttttcaagcaccggaaaacacaggtatgtgctaaaacatctggattgaatcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ataacttttcaagcaccggaaaacacaggtatgtgctaaaacatctggattgaatcattt 776
Query: 181 tctttaaaaaaaatagacaaaataatattttaaaccaaaaagtaaaatgataagatttct 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 775 tctttaaaaaaaatagacaaaataatactttaaaccaaaaagtaaaatgataagagttct 716
Query: 241 aataaagccaacaatggaatataatcagactccaaatatctttgaagtataataaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aataaagccaacaatggaatataatcagactccaaatatctttgaagtataataaaagaa 656
Query: 301 aaaaagaaaaagaaaatcagtacagcaaaagagcaaagctggcttgaagacaatgaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aaaaagaaaaagaaaatcagtacagcaaaagagcaaagctggcttgaagacaatgaggag 596
Query: 361 tgaagaatatggatggatggaagaaaaggtcagtctagctaggagtgagaggcattatgt 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgaataatatggatggatggaagaaaaggtcagtctagctaggagtgagaggcattatgt 536
Query: 421 attgagtactggtaataacgtctgcaaatgaggctgggatctggaggagaggtaccacgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 attgagtactggtaataacgtctgcaaatgaggctgggatctggaggagaggtaccacgc 476
Query: 481 tctcatgtatggaacaagtattccaaggcaagtgctgttcctcatgtcatcttgattaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tctcatgtatggaacaagtattccaaggcaagtgctgttcctcatgtcatcttgattaat 416
Query: 541 ccactttttgtgggaaatataatagttactctatttcaaaattgaagaaatagagcaccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccactttttgtgggaaatataatagttactctatttcaaaattgaagaaatagagcaccg 356
Query: 601 ganagttcacacagttggctcaatttcatcttgg 634
|| |||||||||||||||||||||||||||||||
Sbjct: 355 gaaagttcacacagttggctcaatttcatcttgg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
