XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGAA
AATCTTTAATTCCTCTTTCCTTTTTAAATTTCCTTGTAATTGCCCTGATG
GTTGAAAGCTGATGGCTTCTGGAAACTTAAAACTTTCTGGCTTATTTTGT
GGTTAAATTTGCCCACCTTTGATGATTAATACCTGTGGTTTAATAGTGGA
GTATTGAGTTAGGACACAGTGCCTTCCTTGCTCAGTGCTAAAAGTTCTTT
AACCTTGTGTAGCCAGAGAAATTCACATTCACAAGAAAAAGTACTCACTT
CAAAAGAAGGCTTTAGACTTCATTTCTAGGAGAGAGAGAAAAGCGGGAAC
CTATTTCCTATTGTAATCAATTCTTACACTTTTTCATGATACATGATCGT
ATGGTATTCCAAGCTTCTATTTCATAAAAGGTACTAGCAAGTTCACAACA
TTACTACAAGTCAATAAATCAAATAAGGAATGTCAGGAAGAATGTTACCT
GCAAGTCCATTGTGATTGGTTATTAATTATATATTCATTAGCTGCTAGTA
ACTCCACAAGTTCATACAAGTTTTAACTAAATTTTATGTCAAGGGGGGTC
AATCATCTGCCCAGTGTCTCATTCATTTTGAAGTTTTGTACAGATACATC
TAGNCAATATTTTATCTTTTGTCTTTGAACGTCCTAGAAATTGTTGATTC
TCAGTTTGTGAAAATACTTATCAGAATATGCATTCACATCTATCATAGAA
GTAATAGTTTCTCTGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTGACCTAATGTGTTAAAATTTAAAAAAAAAAAACTAA
ATATAAAAATCCTTCCTTAAGTAAATTTACAAACCATTTTACAATTTGAT
CAATCTAGTTACAGAACAAACCACTTTTATCAATGGACATATCGTGGAAA
CAGAAACTAAATAGGGACACAGTGAAACTAACAGAAGTTATTAAACAAAT
GGACTTAATAGATATCTACAGAATGTTTTATCCTGAAACAAAAGGATGTA
ACTTTTTCTCAGGACATCATGGTACCTTCTCCAAAATTGACCATATAATT
GGTCATAAAACAGGCCTCAACTGATAAAAAATATTGCAATTGTCCAAAGC
ATCCTATCAGACCACCAAGGACTTAGGATGATTCATCTTCAATAACAACA
TTAATAATGGAAAGCCAACACTTACGTTGAAAATGAACAACAGTCTTTTC
AGTGATACCTTGGTCAAGGAAGGGATATAGAAGGAAATTAAAGACATTTT
AGAGTTTAATGAAAATAAAGCCACAACATTCCCTAACTTATGAGACTCAA
TGAAATCATTACTAAGAGGGAAACTCATAGATTTGAGTACCTCAAAAAAG
AAACCAGAGAGAGCACATACAAGCAGCTTGAGAACACATGAAAAATCTCC
AAAATNAAGGAAGCAAATTCACTCAAGAAGAGTAGATGGGAAGAAATAAT
CAAACTCAGGGGTGAAATTATCC

Query= MSMg01no524_f05.b1 MSMg01no524_f05.b1 CHROMAT_FILE:
MSMg01no524_f05.b1 PHD_FILE: MSMg01no524_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:34 2005
         (648 letters)



>mm_chrX_122360478_122361525
          Length = 1048

 Score = 1011 bits (523), Expect = 0.0
 Identities = 616/648 (95%), Gaps = 9/648 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagaaaatctttaattcctctttcctttttaaatttccttgtaattgccctgat 64
           |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattctagaaaatctttaattcctctttcctttttaaatttccttctaattgccctgat 264

                                                                       
Query: 65  ggttgaaagctgatggcttctggaaacttaaaactttctggcttattttgtggttaaatt 124
           ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 265 ggttgaaagctgatggcttctggaagcttaaaattttctggcttattttgtggttaaatt 324

                                                                       
Query: 125 tgcccacctttgatgattaatacctgtggtttaatagtggagtattgagttaggacacag 184
           |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcccaactctgatgattaatacctgtggtttaatagtggagtattgagttaggacacag 384

                                                                       
Query: 185 tgccttccttgctcagtgctaaaagttctttaaccttgtgtagccagagaaattcacatt 244
           |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 tgccttccctgctaagtgctaaaagttctttaaacttgtgtagccagagaaattcacatt 444

                                                                       
Query: 245 cacaagaaaaagtactcacttcaaaagaaggctttagacttcatttctaggagagagaga 304
           ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 445 cacaagaaaaagtactcacttcaaaagaaggatttagactttatttctaggagagagaga 504

                                                                       
Query: 305 aaagcg-ggaacctatttcctattgtaatcaattcttacactttttcatgatacatgatc 363
           |||| | |||||||||||||| ||||| |||||||||||||||| ||| |||||||||| 
Sbjct: 505 aaag-gtggaacctatttcctgttgtattcaattcttacactttctcaggatacatgat- 562

                                                                       
Query: 364 g-tatggtattccaagcttctatttcataaaaggtactagcaagttcacaacattactac 422
           | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 563 gatatggtattccaagcttctattttataaaaggtactagcaagttcacaacattaatac 622

                                                                       
Query: 423 aagtcaataaatcaaataaggaatgtcaggaagaatgtt-acctgcaagtccattgtga- 480
           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 623 aagtcaataaatcacataaggaatgtcaggaagaatgtttacctgcaagtccattgtgag 682

                                                                       
Query: 481 ttggttattaattatatattcattagctgctagtaactccacaagttcatacaagtttta 540
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttg-ttattaattatatattcattagctgctagtaactccacaagttcatacaagtttta 741

                                                                       
Query: 541 actaaattttatgtcaaggggggtcaatcatctgcccagtgtctcattcattttgaagtt 600
           | |||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||
Sbjct: 742 aataaattttatgtcaagggg--tcaatcatctgcctagtgtctcattcattttgaagtt 799

                                                           
Query: 601 ttgtacagatacatctagncaatattttatcttttgtctttgaacgtc 648
           ||||| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 800 ttgtatagataaatctagtcaatattttatcttttgtctttgaacgtc 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)