Query= MSMg01no524_i18.b1 MSMg01no524_i18.b1 CHROMAT_FILE:
MSMg01no524_i18.b1 PHD_FILE: MSMg01no524_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:51 2005
(638 letters)
>mm_chrX_149691315_149692352
Length = 1038
Score = 963 bits (498), Expect = 0.0
Identities = 510/514 (99%)
Strand = Plus / Minus
Query: 125 gactataacctaataatgtatttgaggtccttacagaaacatgactgtacagccgtgact 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 gactataacctaataatgcatttgaggtccttacagaaacatgactgtacagccgtgact 978
Query: 185 ctcaacttcagctgcagggcaaaaatcactggagtggcttaacacagccacagttcccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 ctcaacttcagctgcagggcaaaaatcactggagtggcttaacacagccacagttcccac 918
Query: 245 actctatcccagaccattcacatcggaatggctggggattgagggatagctttcatcact 304
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 actctatcccagaccaatcacatcggaatggctggggattgagggatagctttcatcact 858
Query: 305 ttaaaccactctcaaggtgtatagaacaccaccacacaccaccttcatgagctacccaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ttaaaccactctcaaggtgtatagaacaccaccacacaccaccttcatgagctacccaga 798
Query: 365 caggaacttcttaaagtttcctttatgagccaggaaataaaacaaaaatgtcatagttat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caggaacttcttaaagtttcctttatgagccaggaaataaaacaaaaatgtcatagttat 738
Query: 425 aatttcctttcttttctttagagctttacatgtgtatccccataaacctgtcacaatctc 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 737 aatttcctttcttttctttagagctttacatgtgtattcccataaacctgtcacaatctc 678
Query: 485 ttttttccacacaaaataaagccaaaaggtattgctttaattgacttggcaatggttatt 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttttttcacacaaaataaagccaaaaggtattgctttaattgacttggcaatggttatt 618
Query: 545 gcaattttgttccactccctaggaactttggaaattcatatctatgacagataatcttga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gcaattttgttccactccctaggaactttggaaattcatatctatgacagataatcttga 558
Query: 605 actacctctatagaatacatgatgatgaacctct 638
||||||||||||||||||||||||||||||||||
Sbjct: 557 actacctctatagaatacatgatgatgaacctct 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_i18.g1 MSMg01no524_i18.g1 CHROMAT_FILE:
MSMg01no524_i18.g1 PHD_FILE: MSMg01no524_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:51 2005
(593 letters)
>mm_chrX_149590768_149591760
Length = 993
Score = 1089 bits (563), Expect = 0.0
Identities = 586/595 (98%), Gaps = 5/595 (0%)
Strand = Plus / Plus
Query: 1 cacatcacccccaggctctcttgagtgttctcattacttcttgaaattgcatctttaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cacatcacccccaggctctcttgagtgttctcattacttcttgaaattgcatctttaact 258
Query: 61 ctaatcagaatcaaaatcacttcagaaaactcatcacaagattctactctaactcttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctaatcagaatcaaaatcacttcagaaaactcatcacaagattctactctaactcttaag 318
Query: 121 aatctttctttttcctcttctgagtacattgcccaagcctttggtataggagtttaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatctttctttttcctcttctgagtacattgcccaagcctttggtataggagtttaggtt 378
Query: 181 aaagacatctcattgggggctgagtgtggcaaagtttctcattctgggtaccatgtccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaagacatctcattgggggctgagtgtggcaaagtttctcattctgggtaccatgtccag 438
Query: 241 cagttgtgggtcattgtgcaagttaccatatactgcaagaagcttctctcatttataggt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagttgtgggtcattgtgcgagttaccatatactgcaagaagcttctctcatttataggt 498
Query: 301 atagcaatgttttaacttccaggttttgggtttttttttt-gtttgtttg-tttgttttg 358
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 499 atagcaatgttttaacttccaggttttgggtttttttttttgtttgtttggtttgttttg 558
Query: 359 ttttgttttgtttttaaagagagacagagaatgaacacatggagacaggtggaggctggc 418
|||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 559 tttttttttttttttaaagagagacagagaatgaacacatggagacagatggaggctggc 618
Query: 419 aagtatgaaaattggatgggaagccaacatactacagaactataaaacttcaattttgta 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagtatgaaaattggatgggaagccaacatactacagaactataaaacttcaattttgta 678
Query: 479 caagaaataaaaagacaatctagacatgtctagaggagagtgtttcacagcagattttcc 538
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 679 caagaaataaaaagacaatctagacatgtctagag---agtgtttcacagcagattttcc 735
Query: 539 agttttatggctctcacaatctttctgccccctcttctgcagtgtttcctgagcc 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 agttttatggctctcacaatctttctgccccctcttctgcagtgtttcctgagcc 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
