XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTCTCG
CACCTTCGTACAAGGCTTCTTTACTAGTTAGCCACAGCGGAGGCCCGCGC
CATCTTATAATGGCGATTGCTCGCGGCACACACGGCTCTCCTCAGAGATT
ACTGGTGGCATGCACGAGATTGCTCGCAGTACATACCTGCTCTCCACATC
TTCCCCTTTTTATTTTATTAAAACTTGAGGCTGGTCTAGGCCTGTGTAAC
TTTGCCCATCCACTGTGGCTCCTGTCTTAGATCATTCCTCCAATGTCACA
GCCTTTCCTGTCATAGGGTAACCCTATCGCCACCGGGCCCCGTGTCTTAG
GTTGATCTGTGCATGAGGAAAGTTGCCCGTCCCTGGATACCACAGTGCTA
TGTGACATTAACTACTAAATAAACTAGGGCGAACTCTATAAAAGAGGACA
GCCACCAATGTCAATTAATTTTTGAGCATAGATAGCCAGATTTCAGGGAA
GGCCCCTTGCTTGATGGCAGCAAGTGCTTGGGTTATCAAAATCTTGTCAC
GTGTTTGTTGGGTTCTGAGCTTGCAAACCAACCAGAGCATGACCACAAGT
CCACAACAGGTGGCAACACCAAATAAACCTACCCCCACCCATTCCTTAAA
ATAAGAAAAGGCAGATGAAATCCAGGAGGAGAGGACCTCTGTCAATGACA
GGTCCACTCGTGTTGAGTTGATCTTTAGAACGGNCACTCTTAAGACCTCA
AGGGTCTCATCGG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAAGAAGAAAGAACTTATGGCATAGCACTGAGGC
AATGGCACAAGGAAATAACTGGTTGATAGAAAGTGTCCCTGAGTTTCTGA
ATGATGCAAGCCTTTATTGCTGCACAGCCAAAGGGAAACAGAAATCCTTC
ACAAAAATCAAAGAGAGGAGCCAAATAAACACCTTTCATCCAGCAAGATC
AAAAACTGCTCTTAGAAAACTGGCAAAGTGTACAAAACAGGCAAAACAAG
TTTCTGTGTCAGTAAAGTAGGATCTTCACTTATAGCCTCAATTTTACACT
TTCTCAGTGTACCAATTTCTATAAAACATGACTTTCAAAGAATCAGCTTG
ACTAAGTGTTTAATAAACAATCCTGTGCAACTATATTCCAGCTGCATCAT
TGGACATAAACTGAATTTTCCATGTGTTGCCACTGATGTGAGCCATTATC
CTGTTGTGCTTCAGGAGATTTATATGACCTTCAACAAGCAATCCAAATAT
GAAAATGAATAAGAACCCAACTTGCTAACTGTGACAGACAAAACAATTAT
TTAAGGCCACTAGTGCTACATTCAGGAGTCCAACTTTGTCTGTGTTCTGA
ATCTAGTCAAAAACAGTTAAAATATTGGAAATAAAACTTGCATCTGTACT
ATAAATAGATTACTGTTTTGCCCTTATTCTCTGAACAATACATGTTAATT
GCACAGTAATATTTCAGTAAGTATTAGTCATT

Query= MSMg01no525_k21.g1 MSMg01no525_k21.g1 CHROMAT_FILE:
MSMg01no525_k21.g1 PHD_FILE: MSMg01no525_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:23 2005
         (597 letters)



>mm_chrX_140471448_140472446
          Length = 999

 Score =  505 bits (261), Expect = e-147
 Identities = 436/495 (88%), Gaps = 16/495 (3%)
 Strand = Plus / Minus

                                                                       
Query: 110 agccaaagggaaacagaaatccttcacaaaaatcaaagagaggagccaaataaacacctt 169
           ||||| |||||||||||||| ||||||||||||||||||||| | ||||| |||| ||||
Sbjct: 797 agccagagggaaacagaaattcttcacaaaaatcaaagagagcacccaaacaaacccctt 738

                                                                       
Query: 170 tcatccagcaagatcaaaaactgctcttagaaaactggcaaagtgtacaaaacaggcaaa 229
           |||||||||||||||||||| | |||  ||||||||||||| |||| |  |||| |||||
Sbjct: 737 tcatccagcaagatcaaaaaattctcaaagaaaactggcaaggtgtgc--aacaagcaaa 680

                                                                       
Query: 230 acaagtttctgtgtcagtaaagtaggatcttcacttatagcctcaattttacactttctc 289
            ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 679 ccaagtttctctgtcagtaaagtaggatcttcacttatagcctcaattttactctttctc 620

                                                                       
Query: 290 agtgtaccaatttctat-aaaacatgac-tttcaaagaatcagcttgactaagtg-ttt- 345
            ||||||||||| || | |||||||||| ||||||||||||| |||| ||||| | ||| 
Sbjct: 619 ggtgtaccaattgctgtcaaaacatgacatttcaaagaatcaacttgtctaag-gatttc 561

                                                                       
Query: 346 aataaa-caatcctgtgcaactatattccagctgcatcattggacat-aaactgaatttt 403
           || ||| || |  |||||||||||||||||||||||||||||||| | ||| |||||   
Sbjct: 560 aa-aaatcattt-tgtgcaactatattccagctgcatcattggac-tgaaagtgaatggc 504

                                                                       
Query: 404 ccatgtgttgccactgatgtgagccattatcctgttgtg-cttcaggagatttatatgac 462
           ||||||||||||||||||||||||  ||| ||||||||| |||||||||| |||||||||
Sbjct: 503 ccatgtgttgccactgatgtgagctgttagcctgttgtggcttcaggagaattatatgac 444

                                                                       
Query: 463 cttc-aacaagcaatccaaatatgaaaatg-aataagaacccaacttgctaactgtgaca 520
           |||| || |||||||| ||||||| ||||| |||| ||||||||| |||||||| |||||
Sbjct: 443 cttccaa-aagcaatctaaatatgtaaatgtaataggaacccaacctgctaactttgaca 385

                                                                       
Query: 521 gacaaaacaattatttaaggccactagtgctacattcaggagtccaactttgtctgtgtt 580
           |||| | ||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 384 gacatagcaattgtttaaggccacaagtgctacatgcaggagtccaactgtgtctgtgtt 325

                          
Query: 581 ctgaatctagtcaaa 595
           |||||||||| ||||
Sbjct: 324 ctgaatctagccaaa 310


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 999
Length adjustment: 10
Effective length of query: 587
Effective length of database: 989
Effective search space:   580543
Effective search space used:   580543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)