XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTG
TTCTGTTCTGAGCCCCATTTTTAATGGGGTTATTTGAATTTGTGAAGTCC
ACCTTCTTGAGTTCTCTATATATGTTGGATATTAGTCCCCTATCTGATTT
AGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTAGTCTTAT
TGACGGTGTCTTTTGCCTTGCAGAAACGTTGGAGTTTCATTAGGTCCCAT
TTGTCAATTCTCAATCTTACAGCACAAGCCATTGATGTTCTGTTCAGGAA
TTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCAGTGTCTCTGGTTTTATGTGCAGTTCTTTGATCCATTTAGAT
TTGACCTTAGTACAAGGAGATAAGTATGGATTGATTCGCATTCTTCTACA
TGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTACT
TTCACTGGATGGTTTTACCTCCCTTGTCAACGATCAAGTGACCATAGGTG
TGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCACTGGTCTACGTGTCT
GTCAATATTCCAGTACCATGCAGTTTTTATCACAATTGCTCCGTAGTANA
GCTTTAGGTCAGGAATGGTGATTCCACCAGAGGTTCTTTTATCTTTGAGA
AGAGATTTTGCTATCCTAGTTTTTTTGTATTCCAGATGAATTTGCAGATT
GCTCTTT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGACAGTGTCACTGACTTGCTCAGAAGTAGAATCA
TGATTTGTTGTTACTTTAGTAATTCTGTTGATTGGAATTACTCATATGAA
GTTGTCAATATCCTAATAAAGGCATTTTATACTTATACAGTATCTATAAA
TGGTAGGAATATGTACGAATAAAGTCAAGGAATTCACTATCATTAATGCA
ACATTGCATATAATCAGAACTAAAACTATAGATTTCAGACTTTATCTTTA
ATATTCTTTATATAACAGCACCTCTCACTATAAATATTGTAAAATAGATT
ATTGCTGTTAATGAGATAGAGAAGTCTTAACTGATTTGGAGAGTGACTTC
CTTTCCAAAAGGAAATATTCTTCCTACAGTAGGTAATATTTGACTTTCAG
AACATCTTACATGTTTTGAAAATAATGTAATAGTGCTTCCATATTGAAGA
ATAAATCCTTCTTACAAAAAATTCTATTTATGCTCAATTATCCACATATA
CAAATCCAAAGATTTGATATTTAAGATCTGAATTTGGCACTTACTTTTGA
TAATAGATTAATGCTTACTCTAATTTAAGTTGAAGATGGAAATGAATTTG
AAGGGTTGATAATTGTTAAATTAAGAGGAATACAGAGCAATTTATCAGAT
ATGGAAATTTATTTTAGAGAATACTGCCTTATTTTCTGACAATTAATATT
CACTGCTCCAAAA

Query= MSMg01no525_l10.g1 MSMg01no525_l10.g1 CHROMAT_FILE:
MSMg01no525_l10.g1 PHD_FILE: MSMg01no525_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:25 2005
         (655 letters)



>mm_chrX_53270496_53271551
          Length = 1056

 Score =  953 bits (493), Expect = 0.0
 Identities = 616/657 (93%), Gaps = 3/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agacagtgtcactgacttgctcagaagtagaatcatgatttgttgttactttagtaattc 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 agacagtgtcactaacttgctcagaagtagaatcatgatttgttgttactttagtaattc 797

                                                                       
Query: 61  tgttgattggaattactcatatgaagttgtcaatatcctaataaaggcattttatactta 120
           ||||| | || |||| |||||||||| | ||||||||||| ||||||||||||||||| |
Sbjct: 796 tgttgctcgggattagtcatatgaagctatcaatatcctactaaaggcattttatactca 737

                                                                       
Query: 121 tacagtatctataaatggtaggaatatgtacgaataaagtcaaggaattcactatcatta 180
           || |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 736 tatagtaactataaatggtaggaatatgtatgaataaagtcaaggaatttactatcatta 677

                                                                       
Query: 181 atgcaacattgcatataatcagaactaaaactatagatttcagactttatctttaatatt 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 676 atgcaacattgcatataatcagaactaaaactatagatttcagactttatctctaatatt 617

                                                                       
Query: 241 ctttatataacagcacctctcactataaatattgtaaaatagattattgctgttaatgag 300
           |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 616 ctttatataacagcacctctcactgtaaatattataaaatagattattgctcttaatgag 557

                                                                       
Query: 301 atag-agaagtcttaactgatttggagagtgacttcctttccaaaaggaaatattcttcc 359
           |||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||
Sbjct: 556 ataggagaagtcttaactgatttggagattgacttcctttccaaactgaaatattcttcc 497

                                                                       
Query: 360 tacagtaggtaatatttgactttcagaacatcttacatgttttgaaaataatgtaatagt 419
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 496 tacagtaggtaatatttgactttcaaaacatcttacatgttttgaaaataatgtaatagt 437

                                                                       
Query: 420 gcttccatattgaagaataaatccttcttacaaaaaattctatttatgctcaattatcca 479
           ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| || ||
Sbjct: 436 gcttccatattgaaggataaatccttcttacaaaacattctatttatgttcaatcattca 377

                                                                       
Query: 480 catatacaaatccaaagatttgatatttaagatctgaatttggcacttacttttgataat 539
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 catatacaaatccaaa-atgtgatatttaagatctgaatttggcacttacttttgataat 318

                                                                       
Query: 540 agattaatgcttactctaatttaagttgaagatggaaatgaatttgaagggttgataatt 599
           ||||||| |||| ||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 317 agattaaagcttcctctaatttaatttgaagatagaaatgaatttaaagggttgataatt 258

                                                                    
Query: 600 gttaaattaagaggaatacagagcaatttatcagatatggaaattt-attttagaga 655
           |||||||||||||| ||||||| |||  |||||| ||||||||||| |||| |||||
Sbjct: 257 gttaaattaagagggatacagaacaaggtatcaggtatggaaattttatttcagaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space:   674670
Effective search space used:   674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)