Query= MSMg01no526_h24.b1 MSMg01no526_h24.b1 CHROMAT_FILE:
MSMg01no526_h24.b1 PHD_FILE: MSMg01no526_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:26 2005
(484 letters)
>mm_chrX_13968695_13969578
Length = 884
Score = 905 bits (468), Expect = 0.0
Identities = 474/476 (99%), Gaps = 1/476 (0%)
Strand = Plus / Plus
Query: 5 gaattcacatgtgaatgattcttctgttcttaaatatatttcagttatccttaatatcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatgtgaatgattcttctgttcttaaatatatttcagttatccttaatatcct 264
Query: 65 agcttatatgtctttctttttgtttccaattttatttattttaacttaaaatgatatgta 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcttatatgtctttctttttatttccaattttatttattttaacttaaaatgatatgta 324
Query: 125 tgttgttttgttatttcaaagaatttatacaactacaaatataggtacttaagtagcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgttgttttgttatttcaaagaatttatacaactacaaatataggtacttaagtagcaaa 384
Query: 185 tttgtcagtttatatattcaccagttttgaagtgattacacattatatccattgatttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgtcagtttatatattcaccagttttgaagtgattacacattatatccattgatttta 444
Query: 245 gagttttcaaaagttcaatgtaatattattaactataattacaatagacttctttaaatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagttttcaaaagttcaatgtaatattattaactataattacaatagacttctttaaatt 504
Query: 305 ttctccaatctcatagtatacttgaaaagcatatccctacttctcccctgccctgatcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctccaatctcatagtatacttgaaaagcatatccctacttctcccctgccctgatcca 564
Query: 365 ctcatctgatgccaactaacattttagcttttgcttctaaattttcatagtccacatata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcatctgatgccaactaacattttagcttttgcttctaaattttcatagtccacatata 624
Query: 425 aatgacatcttgtagtttttgattttctgtttctgcattatttaatttaaacttaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 625 aatgacatcttgtagtttttgattttctgtttctgcattatttaatttaa-cttaa 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h24.g1 MSMg01no526_h24.g1 CHROMAT_FILE:
MSMg01no526_h24.g1 PHD_FILE: MSMg01no526_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:26 2005
(647 letters)
>mm_chrX_14117825_14118870
Length = 1046
Score = 1212 bits (627), Expect = 0.0
Identities = 642/647 (99%), Gaps = 1/647 (0%)
Strand = Plus / Minus
Query: 1 ttcacaaggaagataatgtttgcaatgcatatttagatctcaaactgataaccacaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 ttcacaaggaagataatgtttgcaatgcatatttagatctcaaactgataaccacaaact 787
Query: 61 ttagtttggaattgcaagaatcccttaacatctagtcctgagtgcaataaatttccaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ttagtttggaattgcaagaatcccttaacatctagtcctgagtgcaataaatttccaagg 727
Query: 121 tcttaggaatttaaaatgtaggctatgatttattagtctagttcagttactataagaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tcttaggaatttaaaatgtaggctatgatttattagtctagttcagttactataagaata 667
Query: 181 cgaagaaattgttaaaatgaagtaaaagtatctccatttttatttggataagacaaattc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgaagaaattgttaaaatgaagtaaaagtatctccatttttatttggataagacaaattc 607
Query: 241 gtttttacaatgataaaatagggggtagaaattttagaaaagagggaaagtaagatgaag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtttttacaatgagaaaatagggggtagaaattttagaaaagagggaaagtaagatgaag 547
Query: 301 gagagacctttaagaatgtccattagtggtaaaggcaacctcccatcactttctgagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gagagacctttaagaatgtccattagtggtaaaggcaacctcccatcactttctgagact 487
Query: 361 gtctcccttcatccatccattggtgtgggggcattatcaggtttgtgttttatataccaa 420
||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 486 gtctcacttcatccatccattggtgtgggg-cattgtcaggtttgtgttttatataccaa 428
Query: 421 agtttcatatcacatctgattagacacaagagagacaacagcaaccctcctcgaaagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtttcatatcacatctgattagacacaagagagacaacagcaaccctcctcgaaagctg 368
Query: 481 ggcaaatcacagttgtttcccttttgaagatgtgattgagatagcaaataattcaagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggcaaatcacagttgtttcccttttgaagatgtgattgagatagcaaataattcaagttg 308
Query: 541 gtcttctcttgtgtctattataatagtggactggtaaaaacatgggaactcagaatcagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtcttctcttgtgtctattataatagtggactggtaaaaacatgggaactcagaatcagt 248
Query: 601 ccttacctactatgcaagaggacaagctacaatgaagtgacaaagtg 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccttacctactatgcaagaggacaagctacaatgaagtgacaaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space: 659932
Effective search space used: 659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
