Query= MSMg01no527_m03.b1 MSMg01no527_m03.b1 CHROMAT_FILE:
MSMg01no527_m03.b1 PHD_FILE: MSMg01no527_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:08 2005
(644 letters)
>mm_chrX_53942761_53943804
Length = 1044
Score = 1222 bits (632), Expect = 0.0
Identities = 641/644 (99%)
Strand = Plus / Minus
Query: 1 cacctaggttgagcagagaggctgcatcattacatttggcatcatgagggtcagtgatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 cacctaggttgagcagagaggctgcatcattacatttggcatcatgagggtcagtgatgg 764
Query: 61 ccctgaaaagacatcttaaaatacagcagtgagtgtgaaaacctgaacagagtaaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ccctgaaaagacatcttaaaatacagcagtgagtgtgaaaacctgaacagagtaaaatta 704
Query: 121 aaagcataaacttagtagttcctgttggaggagattagggaagcaagtccttactttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aaagcataaacttagtagttcctgttggaggagattagggaagcaagtccttactttgcc 644
Query: 181 aactaagcctgaaaagtcaagtctctctgctgtctttctctagaagcagcagaaagccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aactaagcctgaaaagtcaagtctctctgctgtctttctctagaagcagcagaaagccac 584
Query: 241 attgcgggctaggtccccacgatgaagaaggatggtctcgaataataccaccactttgcc 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 583 attgcgggctaggtccccacgatgaagaaggatgctctcgaataataccaccactttgcc 524
Query: 301 actgccagcagctgctaatgtcacactaggaattcaccaccctgtcatgcttgctaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 actgccagcagctgctaatgtcacactaggaattcaccaccctgtcatgcttgctaatgt 464
Query: 361 gaccacataccattacagtgatgtgctctctagcagcacacatgtatgtcatgtacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaccacataccattacagtgatgtgctctctagcagcacacatgtatgtcatgtacttgg 404
Query: 421 accagattcacttattgccctcttttgtgcctctcagcttctcctgatggtcctcttcat 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 accagattcactcattgccctcttttgtgcctctcagcttctcctgatggtcctcttcat 344
Query: 481 ttcatatagtggctaagtaaaagaaaaatccaatcaagtttcattaggcgtctagtgtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttcatatagtggctaagtaaaagaaaaatccaatcaagtttcattaggcgtctagtgtat 284
Query: 541 caatatacagggactactggaaacaaaagaattcatttaaatggcaccacagtggtgaaa 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 283 caatatacagggactactggaaacaaaagaatacatttaaatggcaccacagtggtgaaa 224
Query: 601 cactagacaacagccttttggaaattgtatatgatgaaaaaaaa 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cactagacaacagccttttggaaattgtatatgatgaaaaaaaa 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_m03.g1 MSMg01no527_m03.g1 CHROMAT_FILE:
MSMg01no527_m03.g1 PHD_FILE: MSMg01no527_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:08 2005
(659 letters)
>mm_chrX_53800584_53801644
Length = 1061
Score = 1234 bits (638), Expect = 0.0
Identities = 655/662 (98%), Gaps = 4/662 (0%)
Strand = Plus / Plus
Query: 1 aatggtacagttttaaaacgtatccccacacttaaagggccaagtaagaaatcaaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggtacagttttaaaacgtatccccacacttaaagggccaagtaagaaatcaaaggat 260
Query: 61 gaaggaaaggaatgaattcataaaacagatgggagaaaaagcaattgaaattgtgatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggaaaggaatgaattcataaaacagatgggagaaaaagcaattgaaattgtgatcct 320
Query: 121 ggggagccagagcccaacaggaaccttggaaaggcaaaggtcagatatcagacaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggagccagagcccaacaggaaccttggaaaggcaaaggtcagatatcagacaaaacaa 380
Query: 181 ttaacagaaagcatctggactaaaaaaaaaatctaggaatcaaagacaagattgaggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaacagaaagcatctggactaaaaaaaaaatctaggaatcaaagacaagattgaggaat 440
Query: 241 tattactttcacatagcgaaaaaaaaaggaaaaacaaacaaacaaacaacaac---caca 297
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 441 tattactttcacatagcgaaaaaaaa-ggaaaaacaaacaaacaaacaacaacaaccaca 499
Query: 298 gcagtcatgaccacaactttcaggaatgcagggacatgatgaagaggtcaatcatatgaa 357
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 gcagtcatgaccacaactttcaggaatgcagggacatgatgaagaggccaatcatatgaa 559
Query: 358 cttttagcttaaaagaaggaaccaaggctcagtctaaccacgtacactctagtgcctctt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttttagcttaaaagaaggaaccaaggctcagtctaaccacgtacactctagtgcctctt 619
Query: 418 caggtcatcagacagctctaacgtggaaggggcagaacaaaagaaaaatactggaagctg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caggtcatcagacagctctaacgtggaaggggcagaacaaaagaaaaatactggaagctg 679
Query: 478 tgagatggcagctccaagttaggtccaaaggcacacccatcagactctcaagagacgtct 537
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgagatggcagctccgagttaggtccaaaggcacacccatcagactctcaagagacgtct 739
Query: 538 ttgcagaagagatgagaaccaaagactgatctatttcaaaccttgaaaatcagccattac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgcagaagagatgagaaccaaagactgatctatttcaaaccttgaaaatcagccattac 799
Query: 598 tggtgaagacgactgtgcccagtagatttattctttaaacccagagtagaaagaaaatct 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tggtgaagacgactgtgcccagtagatttattctttaaacccagagtagaaagaaaatct 859
Query: 658 tt 659
||
Sbjct: 860 tt 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1061
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1051
Effective search space: 682099
Effective search space used: 682099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
