NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTTCTTAACTTTACTAATCAGGCAAGTTACTAGGGCTTCATA
TGTTTTCTCTTCTGGAAAGGGGTCTCATTACTTAAGTTTCTCTGGGACAG
TCCTAGTTTATGCTCCTATTCCTGCATGATGTCTGATTAATGCTTCTTCT
TACTCTCACAAGTATTCCTAGTTTGGCAGAGTGTGGTAACTCATGCCTGT
AATTCCAACACTGGGAATGGTGAAGAGGGAAGATCACAATGACTTCAATT
CAAGGCCATGCTGGACTAGACAGTGAGTTCTAGGACAGCTAAGGACAACT
TAAGACTCCTGGCCTACTCCTAAGGTAGTCTATCAAAAAAAAAAAAATAG
ATCACATAGGTTGGGCATGGTGACACATGCCTTTAATCCCAGCACTTGGC
AGGAAGAGACAGGTAGATCTCTGAGTTCCAGATCTCAGTCTACACAGTGA
AGTCCAGAACCACCAGGGCTACCCTGTCTCAAAAAAAAAAGGTGGGGGAA
GAAAAAAATGAATCATGTTGTTATAATACCTCATAGGATTAGTGAAAATT
GAGTGTCATGATACATATAAAGTATTTATAATAGTATGTGGCATATAAAT
TATAGTTTAGTTAGTATTAGTTATTATCAATGTCTTTTTAGAAAAGATTT
TTAATTATGTAATGAAAAATGTTCCTACAATATTCTTTCTTACAAATAAA
ATTATGTATGCATTTAAATAN

CAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTCTGTAGCTAGCCTCGAACTCAG
AGATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGGCA
CCACTGCCCGGCTGATATTGTTGATAGTAGTTAGAAATTGTGAACTTGAT
GTCCAGCAACCAGAGTGGGTATACTGACTCCCACTTGTAATTCCAGCACT
CAGGAGGCTTTGAGTTTGAAACCAATGCATGCTAAGTAGTGAGTGAGTAA
TAAGACATTAAGTCCTTTTCCCCAACCTCAAAGTGCAGTAGTGAAGTGCA
TAGCTATAGAGTAGAGAGCTACTGGGCTAATGAAATCAATAGATAGCTCT
CAAAAGATGAAATATTAATAGCCAATAAACATAAAAGTGTCCACTATCCT
CAGCCATAAAGAAAATAGAAATAAAACAGCACTGAGATACCATTTCATAT
CAGTCAAAATGGCCTTTTTTTTTTTTTTTTTTTTTTTTTGGGGTTTCGAG
ACAGGGTTTCCCTGGAACTCACTTTGTAGAACAAGCTGGGCTCGAACTCA
GAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATGCGCC
ACCATACCTGGCTAAAAATGGCCATTTTTAATGTGGATTATTTTCAATAT
TTCCTCTAGATAAATTCCTAGACCAAGTTTTTTAGAAGACAATATTCAAT
TTTAAAGGTTTGGTTTTTTTTTTTTAACATACACCGCC

Query= MSMg01no530_b07.g1 MSMg01no530_b07.g1 CHROMAT_FILE:
MSMg01no530_b07.g1 PHD_FILE: MSMg01no530_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:17 2005
         (472 letters)



>mm_chrX_39434551_39435422
          Length = 872

 Score =  890 bits (460), Expect = 0.0
 Identities = 460/460 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgtagctagcctcgaactcagagatctgcctgcctctgcctcccaagtgctgggattaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtagctagcctcgaactcagagatctgcctgcctctgcctcccaagtgctgggattaaa 264

                                                                       
Query: 65  ggcatgtggcaccactgcccggctgatattgttgatagtagttagaaattgtgaacttga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcatgtggcaccactgcccggctgatattgttgatagtagttagaaattgtgaacttga 324

                                                                       
Query: 125 tgtccagcaaccagagtgggtatactgactcccacttgtaattccagcactcaggaggct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtccagcaaccagagtgggtatactgactcccacttgtaattccagcactcaggaggct 384

                                                                       
Query: 185 ttgagtttgaaaccaatgcatgctaagtagtgagtgagtaataagacattaagtcctttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgagtttgaaaccaatgcatgctaagtagtgagtgagtaataagacattaagtcctttt 444

                                                                       
Query: 245 ccccaacctcaaagtgcagtagtgaagtgcatagctatagagtagagagctactgggcta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccccaacctcaaagtgcagtagtgaagtgcatagctatagagtagagagctactgggcta 504

                                                                       
Query: 305 atgaaatcaatagatagctctcaaaagatgaaatattaatagccaataaacataaaagtg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaaatcaatagatagctctcaaaagatgaaatattaatagccaataaacataaaagtg 564

                                                                       
Query: 365 tccactatcctcagccataaagaaaatagaaataaaacagcactgagataccatttcata 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccactatcctcagccataaagaaaatagaaataaaacagcactgagataccatttcata 624

                                                   
Query: 425 tcagtcaaaatggccttttttttttttttttttttttttt 464
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcagtcaaaatggccttttttttttttttttttttttttt 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)