NNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCAACCCCTTGTGTTTTCTGTACTATGTAAGATTGGTGTT
CACTTTGTGACAATACATTCAGATTCTACACAATCTCGCATGTTGGTCTG
TCTGTCACCCTGCTGGTGCTTTGCCCACCTGCCCCAGAGATCTGTTCCAT
ACAGACAAAGGGACCCTGAGGGTCTGTGGCACTTTCCCAATCTGTTGGTG
GCATGTTTGTCTTATTGACTGTGTCTTTTGCCTTGCAGAAGCTTTGCAAT
TTTATGAGGTCCCATTTGTTGATTCTCGATCTTACAGCACAAGCCATTGC
TGTTCTATTCAGGAATTTTTCCCTTGTGCCCATATCTTCGAGGCTTTTCC
CTACTTTCTTCTCTATAAGTTTCAATGTCTCTGGTTTTATGTGGAGTTCC
TTAAGCCAGTTATATTTGACCTTAGTACAAGGAGATAGGAATGGATCAAT
TCACATTCTTCTACAGGATAACCACCAGTTGTGCCAGCACCATTTGTTGA
AAATGTTGTCTTTTTTCCACTGGATGGTTTTTGCTCCCTTGTTAAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCGCTATACCAGTACCATGTGGATGCTCACAGTC
AGCTATTGGATGGATCACAGGGCCCCCAATGGTGGAGCT

NNNNTCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGAGAAATTTCCTTAACTC
TGGAGGTATATGCTTGTGTATTAAGGGATAATGATGCTGAGAAAGTTCTA
TATAAAGTTAAGCCATGACATGAATAACTAGGATGTATTTGTTATTAAAA
AATTCTAGCATGAGAATCTAAGTATTAAGCATTTGAATATGACCACAAAT
ATAGTTTAATTATATAATTGTCCATGATGCAATTTGAAAGTGATTAAACC
TTTAGGACCTGGAGCAGAGTGGAAAGAAGTTACATTGTTGGGATGTGTCC
TTGAAGATAGTAGTAAGACACAGGTAATTTTCTCAGCCTTGTATGTCTTC
TTGACTCCATTAAGTTGAGCATCTTCCTTTGCCATGAAGTGCTTCCTAAT
GTACTAAAGCCTAAATACAATGATGTAGCCAATCCTAGATAGAAACTTTT
AAACTATGAGCCCCCAATCTCTCTTTCAAAGCTGATTTAACTCAAACACT
TGTTTTAGTAACAGAAAACTGCCTAACACACCAGGGATGCTTCTATTCAG
TATCCGGTAGAAAAGATGACCATTTTTCTTTCTTTTTAATAAAGAGGATT
TAACTGTTCTTACCCACAGGAAATAAAAAGAGAAAAACCTGTCTATTTAC
CAACAGTTATCTGTAGAAAGAATAGCCACTTACTGAATTCATTCA

Query= MSMg01no531_a03.g1 MSMg01no531_a03.g1 CHROMAT_FILE:
MSMg01no531_a03.g1 PHD_FILE: MSMg01no531_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:31 2005
         (662 letters)



>mm_chrX_113821739_113822803
          Length = 1065

 Score = 1230 bits (636), Expect = 0.0
 Identities = 653/660 (98%), Gaps = 3/660 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagagaaatttccttaactctggaggtatatgcttgtgtattaagggataatgatgctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 cagagaaatttccttaactctggaggtatatgcttgtgtattaagggataatgatgctga 801

                                                                       
Query: 61  gaaagttctatataaagttaagccatgacatgaataactaggatgtatttgttattaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaaagttctatataaagttaagccatgacatgaataactaggatgtatttgttattaaaa 741

                                                                       
Query: 121 aattctagcatgagaatctaagtattaagcatttgaatatgaccacaaatatagtttaat 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cattctagcatgagaatctaagtattaagcatttgaatatgaccacaaatatagtttaat 681

                                                                       
Query: 181 tatataattgtccatgatgcaatttgaaagtgattaaacctttaggacctggagcagagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatataattgtccatgatgcaatttgaaagtgattaaacctttaggacctggagcagagt 621

                                                                       
Query: 241 ggaaagaagttacattgttgggatgtgtccttgaagatagtagtaagacacaggtaattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaaagaagttacattgttgggatgtgtccttgaagatagtagtaagacacaggtaattt 561

                                                                       
Query: 301 tctcagccttgtatgtcttcttgactccattaagttgagcatcttcctttgccatgaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctcagccttgtatgtcttcttgactccattaagttgagcatcttcctttgccatgaagt 501

                                                                       
Query: 361 gcttcctaatgtactaaagcctaaatacaatgatgtagccaatcctagatagaaactttt 420
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctttctaatgtactaaagcctaaatacaatgatgtagccaatcctagatagaaactttt 441

                                                                       
Query: 421 aaactatgagcccccaatctctctttcaaagctgatttaactcaaacacttgttttagta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaactatgagcccccaatctctctttcaaagctgatttaactcaaacacttgttttagta 381

                                                                       
Query: 481 acagaaaactgcctaacacaccagggatgcttctattcagtatccggtagaaaagatgac 540
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 acagaaaactgcctaacacaccagggatgcttctattcagtatccggtggaaaagatgac 321

                                                                       
Query: 541 catttttctttctttttaataaagaggatttaactg---ttcttacccacaggaaataaa 597
           ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||
Sbjct: 320 catttttctttctttttaataaagaggatttaactgttcttcttacccacaggaaataaa 261

                                                                       
Query: 598 aagagaaaaacctgtctatttaccaacagttatctgtagaaagaatagccacttactgaa 657
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 260 aagagaaaaacctgtctatttaccaacatttatctgtagaaagaatagccacttactgaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1065
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1055
Effective search space:   687860
Effective search space used:   687860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)