Query= MSMg01no531_k14.b1 MSMg01no531_k14.b1 CHROMAT_FILE:
MSMg01no531_k14.b1 PHD_FILE: MSMg01no531_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:21 2005
(708 letters)
>mm_chrX_116213555_116214663
Length = 1109
Score = 1321 bits (683), Expect = 0.0
Identities = 701/709 (98%), Gaps = 5/709 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttccat-ctcatgaaattgctgaaaacatccagtttttgttaaggtgacacc 63
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttccaaactcatgaaattgctgaaaacatccagtttttgttaaggtgacacc 264
Query: 64 attcattctcttcatgaagctggtacacatattttattctaccatgaacatcagggtact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attcattctcttcatgaagctggtacacatattttattctaccatgaacatcagggtact 324
Query: 124 ttagaggatcatccttaaatacacaataatttcactgaattgtactaaagtcactgttat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttagaggatcatccttaaatacacaataatttcactgaattgtactaaagtcactgttat 384
Query: 184 tcttagcctatcatgtttgcaccaaggtctataattattttccttattacttagtttgca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttagcctatcatgtttgcaccaaggtctataattattttccttattacttagtttgca 444
Query: 244 tttaatatagaattgaaggtttcagccttaacaattttaagagcaaaacccactaaataa 303
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 445 tttaatatagaattgaaggtttcagccttaacaattttatgagcaaaacctactaaataa 504
Query: 304 acttcttgtgcctatatgctgcatgtctgtctgtctgcatgtatgtacgtatgtataaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttcttgtgcctatatgctgcatgtctgtctgtctgcatgtatgtacgtatgtataaat 564
Query: 364 tgaatgttctactgcctctctccacaatcatcttcctacctatttctctggagacctaac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaatgttctactgcctctctccacaatcatcttcctacctatttctctggagacctaac 624
Query: 424 tgatatagatttgagtgccagaagtggttctactttaacagaattagaagattgtgttta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgatatagatttgagtgccagaagtggttctactttaacagaattagaagattgtgttta 684
Query: 484 ctaaattgttttttgtgtgttagtttgcttgcttcagaaattggctctttaatcactcaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaaattgttttttgtgtgttagtttgcttgcttcagaaattggctctttaatcactcaa 744
Query: 544 ttttaagaaaaaaataacactcatgtcaataatataaaccatactgcaaatctaccatat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttttaagaaaaaaataacactcatgtcaataatataaaccatactgcaaatctaccatat 804
Query: 604 gaaatagagctgatcaaagagatgaagtttccatagtggatactcctcattaatcactca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaaatagagctgatcaaagagatgaagtttccatagtggatactcctcattaatcactca 864
Query: 664 taatagtggttta----gtaagaagagatttagtaactcagaatatgat 708
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 865 taatagtggtttatcttgtaagaagagatttagtaactcagaatatgat 913
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1109
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1099
Effective search space: 767102
Effective search space used: 767102
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no531_k14.g1 MSMg01no531_k14.g1 CHROMAT_FILE:
MSMg01no531_k14.g1 PHD_FILE: MSMg01no531_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:21 2005
(246 letters)
>mm_chrX_116359264_116359909
Length = 646
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 accatgtacacctctactaggaagctgtgaaaataatagaacaccttgttgaatttttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accatgtacacctctactaggaagctgtgaaaataatagaacaccttgttgaatttttag 386
Query: 61 taaaaatgtcgatttcaaaaaaaccttcagttaaattgggacaaagttctaaattcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaaatgtcgatttcaaaaaaaccttcagttaaattgggacaaagttctaaattcacag 326
Query: 121 gattcttggaactgttacttacaatgtaggccaagaaactatagtgttggaagtgtcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattcttggaactgttacttacaatgtaggccaagaaactatagtgttggaagtgtcatg 266
Query: 181 atatttagataaaagttcatttgtttatcaggcttttaaagtggattgcttttatgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatttagataaaagttcatttgtttatcaggcttttaaagtggattgcttttatgttaa 206
Query: 241 atatt 245
|||||
Sbjct: 205 atatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
