Query= MSMg01no532_c10.b1 MSMg01no532_c10.b1 CHROMAT_FILE:
MSMg01no532_c10.b1 PHD_FILE: MSMg01no532_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:00 2005
(526 letters)
>mm_chrX_59859299_59860224
Length = 926
Score = 559 bits (289), Expect = e-163
Identities = 292/293 (99%)
Strand = Plus / Minus
Query: 4 ggaattcattatatttataactcttttaatgaatcctagagtgtctgtaaaaattacatt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ggaattcattatattcataactcttttaatgaatcctagagtgtctgtaaaaattacatt 434
Query: 64 ttaataatataaagtagatatttggacaaaatgaagcttggacaaattttacaagttgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttaataatataaagtagatatttggacaaaatgaagcttggacaaattttacaagttgtg 374
Query: 124 attatttttaaaatagtagggtacttgatgttgacattttgacaactggtagacattgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attatttttaaaatagtagggtacttgatgttgacattttgacaactggtagacattgtg 314
Query: 184 aatttcatgcaaaatgtgtagttttacagtactgagtatgcaaaaacaatatacaactta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatttcatgcaaaatgtgtagttttacagtactgagtatgcaaaaacaatatacaactta 254
Query: 244 aaacggtttgtactacctatcttattttattgaacaaaaataaaagaaaaaag 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaacggtttgtactacctatcttattttattgaacaaaaataaaagaaaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_c10.g1 MSMg01no532_c10.g1 CHROMAT_FILE:
MSMg01no532_c10.g1 PHD_FILE: MSMg01no532_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:00 2005
(558 letters)
>mm_chrX_59737099_59738057
Length = 959
Score = 1042 bits (539), Expect = 0.0
Identities = 554/559 (99%), Gaps = 1/559 (0%)
Strand = Plus / Plus
Query: 1 tggaggaaagaacgctgagcaagcaggagaccagaggtcagactgaagctctgtccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaggaaagaacgctgagcaagcaggagaccagaggtcagactgaagctctgtccctgt 260
Query: 61 ctgactcaggctgtgacatctgcaaaatctggctaatgagggcaactgcctcatggagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactcaggctgtgacatctgcaaaatctggctaatgagggcaactgcctcatggagat 320
Query: 121 gccttgatcttcacatgcttagaatagcacctgtttcactacaattgcagagcatttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttgatcttcacatgcttagaatagcacctgtttcactacaattgcagagcatttgac 380
Query: 181 ctaacatta-gttttctcatcttcaatgagggtggtgactgtccaataactcttagtgag 239
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 ctaacattatgttttctcatcttcaatgagggtggtgaccgtccaataactcttagtgag 440
Query: 240 aaaatgatctgtaaactgtgtcttacatgccataaactgtcactaacaggacataataaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatgatctgtaaactgtgtcttacatgccataaactgtcactaacaggacataataaa 500
Query: 300 gatgtttaaagaagtatacatggtttttcttattaattatttaaattttcatattgtttt 359
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 501 gatgtttaaagaagtatacatggttttccttattaattatttaaaatttcatattgtttt 560
Query: 360 tagctctgatcttcatcttattcattttctttttgagttcaattactatgcaattacata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagctctgatcttcatcttattcattttctttttgagttcaattactatgcaattacata 620
Query: 420 gaaatttgtttttctgcctttcaacactattttgagaaatagctgtttagaataggacca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaatttgtttttctgcctttcaacactattttgagaaatagctgtttagaataggacca 680
Query: 480 ttcatttttatagttccttgaaactttgaactttaaaccattatatttaaactagatttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcatttttatagttccttgaaactttgaactttaaaccattatatttaaactagatttc 740
Query: 540 tatagacatttttgcctag 558
||||||| |||||||||||
Sbjct: 741 tatagacttttttgcctag 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
