CCCTTTAGTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTCAGAAACTGTCAGGCTACATTGAATGAAACTCTA
TTGTAGGAACATCATTACCACCTGTTTGACTTTTTCTCTACTCTCAGCTA
TAGTCCAAGAGGACTGAAGTCTCTGCTATGTAGTTGATTCCAGCCAGAGA
AGTAACACAAGGGTAGAAGCAGAGCCCATCTTTTCTTCCCATTTTATTAG
GCAGCAGTTTATCAGGCCACACTTTGAGGTTTTGCAGCCATGTCTTTATG
TAAACATGGGTCTAATGAAATTGAGTTCCAATTGTAAAAGAAGAGATGAT
ATCTGGGATACTTAAAATTTGAAGCAATTTACAAAACAGTGTTGATATAA
ATGTGTAAGGTGGGAAAGGTATGTTCTTACGTTTGCAAAATAACTTGAAT
ATGGCATTTAAAACGTCTGTTGCTTCTGTATAAAACAATTAACTAGCATG
CTGACGTCAGGAGGGGGAAAGAAATTTGAGGATATTTTTCCTTTTGAATT
AGTGATGTGTAAAATAGTGAAGGAAATTAAAAATAAAGGCTTGAGATTGT
GATGGATAACTTCTAGAAAAAATGTCATTAAGAATCAATACTTGAAGATT
ATCAATTTAATTGTATTTTCTCAAGTTTCAAGGACATGTGACTTCCCAAA
TAGTTTGGATTCAGTTGACTTTTATCTGTAAACTTCATAATACACTCA

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCTCTGAGGAAACAGACTGGGAGGA
AGAAGCAGCTCATTACCAGGCAGCTAATCGGTCAAGAAAAAAGCCAAAAG
CGGCTGGCGAAAGCCAGCATGCTGTTCAGCCTCCGGGCAGTCGGCTTCAA
GGTCCGCCCTATGCGGAGCCCCCGCCCTGCGTAGTGCGTCAGCAATGCGC
AGAGAGACAATGCGCAGAGAGGCAATGCGCAGAGAGGCAATGCGCAGAGA
GACAATGCGCAGAGAGGCAATGCGCAGACTCATTCATTCCCAGAGAGGAA
CAAAGGAAAATACAACAGGCATTTCCGGTCTTTGAAGGAGCCGAGGGTGG
GCGTGTCCACGCTCCGGTAGAATACGTGCAGATTAAAGAACTCGCCGAGT
TGGTCCGTAAATACGGAACCAATGCTAATTTTACCTTGGTGCAGTTAGAC
AGGCTTGCTGGCATGGCACTAACTCCTGCCGACTGGCAAACGATTGTAAA
AGCCGCTCTCCCTAGTATGGGCAAATATATGGAATGGAGAGCGCTTTGGC
ACGAAGCTGCACAAGCGCAGGCCCGAGCAAACGCAGCTGCTTTGACTCCA
GAGCAGAGAGATTGGACTTTTGACTTGTTGACGGGTCAGGGAGCTTATTC
TGCTGATCAGACAAACTACCATTGGGGAGCTTATGCCCAAATTTCCTCCA
CGGCTATTAAGGCCTGGAAA

Query= MSMg01no533_b21.b1 MSMg01no533_b21.b1 CHROMAT_FILE:
MSMg01no533_b21.b1 PHD_FILE: MSMg01no533_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:14 2005
         (647 letters)



>mm_chrX_17771837_17772883
          Length = 1047

 Score = 1220 bits (631), Expect = 0.0
 Identities = 640/643 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcagaaactgtcaggctacattgaatgaaactctattgtaggaacatcattacc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagaaactgtcaggctacattgaatgaaactctattgtaggaacatcattacc 264

                                                                       
Query: 65  acctgtttgactttttctctactctcagctatagtccaagaggactgaagtctctgctat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctgtttgactttttctctactctcagctatagtccaagaggactgaagtctctgctat 324

                                                                       
Query: 125 gtagttgattccagccagagaagtaacacaagggtagaagcagagcccatcttttcttcc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtagttgattccagccagagaagtaacacaagggtagaagcagagcccatcttttcttcc 384

                                                                       
Query: 185 cattttattaggcagcagtttatcaggccacactttgaggttttgcagccatgtctttat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattttattaggcagcagtttatcaggccacactttgaggttttgcagccatgtctttat 444

                                                                       
Query: 245 gtaaacatgggtctaatgaaattgagttccaattgtaaaagaagagatgatatctgggat 304
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 gtaaacatgggtctaatgaaattgagttctaattgtaaaagaagagatgatatctgggat 504

                                                                       
Query: 305 acttaaaatttgaagcaatttacaaaacagtgttgatataaatgtgtaaggtgggaaagg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttaaaatttgaagcaatttacaaaacagtgttgatataaatgtgtaaggtgggaaagg 564

                                                                       
Query: 365 tatgttcttacgtttgcaaaataacttgaatatggcatttaaaacgtctgttgcttctgt 424
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatgttcttacatttgcaaaataacttgaatatggcatttaaaacgtctgttgcttctgt 624

                                                                       
Query: 425 ataaaacaattaactagcatgctgacgtcaggagggggaaagaaatttgaggatattttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ataaaacaattaactagcatgctgacgtcaggagggggaaagaaatttgaggatattttt 684

                                                                       
Query: 485 ccttttgaattagtgatgtgtaaaatagtgaaggaaattaaaaataaaggcttgagattg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccttttgaattagtgatgtgtaaaatagtgaaggaaattaaaaataaaggcttgagattg 744

                                                                       
Query: 545 tgatggataacttctagaaaaaatgtcattaagaatcaatacttgaagattatcaattta 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgatggataacttctagaaaaaatgtcattaagaatcaatacttgaagattatcaattta 804

                                                      
Query: 605 attgtattttctcaagtttcaaggacatgtgacttcccaaata 647
           ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 805 attgtattttctcaagtttcaagaacatgtgacttcccaaata 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)