NNNNTTTTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGAT
CCGCGGAATTCTGAGGGTTTCTGTATTATGGGCTTTTTTTATTTTTATTT
TTTAAAGCGAGATAAATGGGTTTCCTCGATGAATTTCTTTTGTAGTTACA
GCCTGTACTGAGGAAGATGTTTTCCTTGGTAGGTTTTGTTTCTTTTGTAA
CTTTACCAAAGTGTGCAGGTGTGTCTCATGGAAACTGAACCATTTACTAC
AGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTGTTTTGTGTGGG
GTATTTTTTCCTTGTTAGATTGTTAACATATTGCAATAAAATAAAATTCT
GGCCGGGAAAAAAAAATAAAATAAAAAAAAACAACAACAACAACAAAAAA
CAAACAAACCAGGTATGAATCAGGGATCATATACAAAAACTCAAAAGGCA
GATCTCAGAGCCTAAAAGAATTATAATAACTCTTTGAAACTTGATCAAGG
AGTTTTTGCTGGTGATTTCCTTCAGTGAACTTTTGAAATACAGTGGGTCA
GAAAGTGTTTTTCACCTTATGTGTTTTACCTATCATTAATATTGAGACAT
GTACATGTGGTGTTCTTATATCTTTCCTAATATTATTACATTCAACATGA
GATTATTTTCATGGCATCATATGACCATGTGGTCATCTGGAATATATCTT
CATCTGGAGAGCTGAAGTTTTTAAGGCCAAGTGTGTGAGACAAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAAAAACCCTGAGATTCCACCTCACACCAGTCAGAATAGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGTGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGTAGATGCCCCAACTGGTAACAA
GGACACATGCTCCACTATTTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGT
GGATATTAGCACAAAACCTAGGATACCCAAGATATATAATACAATTTGCT
AAACACATGAAACTCAAGAAAAATGAAGTCTGAAGTGTGGACACTATGCC
CCTCCTTAGAAGTGAGAACAN

Query= MSMg01no533_e22.b1 MSMg01no533_e22.b1 CHROMAT_FILE:
MSMg01no533_e22.b1 PHD_FILE: MSMg01no533_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:29 2005
         (676 letters)



>mm_chrX_118447349_118448424
          Length = 1076

 Score =  982 bits (508), Expect = 0.0
 Identities = 545/564 (96%), Gaps = 14/564 (2%)
 Strand = Plus / Minus

                                                                       
Query: 10  gaattctgagggtttctgtattatgggctttttttatttttattttttaaagcgagataa 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaattctgagggtttctgtattatgggctttttttatttttattttttaaagcgagataa 503

                                                                       
Query: 70  atgggtttcctcgatgaatttcttttgtagttacagcctgtactgaggaagatgttttcc 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgggtttcctcgatgaatttcttttgtagttacagcctgtactgaggaagatgttttcc 443

                                                                       
Query: 130 ttggtaggttttgtttcttttgtaactttaccaaagtgtgcaggtgtgtctcatggaaac 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttggtaggttttgtttcttttgtaactttaccaaagtgtgcaggtgtgtctcatggaaac 383

                                                                       
Query: 190 tgaaccatttactacaggcagactggacagcacagttctaagggttgtgttttgttttgt 249
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 382 tgaaccatttactacaggcagactggacagcacagtcctaagggttgtgttttgttttgt 323

                                                                       
Query: 250 gtggggtattttttccttgttagattgttaacatattgcaataaaataaaattctggccg 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtggggtattttttccttgttagattgttaacatattgcaataaaataaaattctggccg 263

                                                                       
Query: 310 ggaaaaaaaaat--aaaataaaaaaaaacaacaacaacaacaaaaaa----------caa 357
           |||||||||||   |||| ||||||||| ||||| || |||||||||          |||
Sbjct: 262 ggaaaaaaaaaacaaaaacaaaaaaaaaaaacaa-aa-aacaaaaaaaaaaaaaaaacaa 205

                                                                       
Query: 358 acaaaccaggtatgaatcagggatcatatacaaaaactcaaaaggcagatctcagagcct 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acaaaccaggtatgaatcagggatcatatacaaaaactcaaaaggcagatctcagagcct 145

                                                                       
Query: 418 aaaagaattataataactctttgaaacttgatcaaggagtttttgctggtgatttccttc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aaaagaattataataactctttgaaacttgatcaaggagtttttgctggtgatttccttc 85

                                                                       
Query: 478 agtgaacttttgaaatacagtgggtcagaaagtgtttttcaccttatgtgttttacctat 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  agtgaacttttgaaatacagtgggtcagaaagtgtttttcaccttatgtgttttacctat 25

                                   
Query: 538 cattaatattgagacatgtacatg 561
           ||||||||||||||||| ||||||
Sbjct: 24  cattaatattgagacatctacatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space:   709956
Effective search space used:   709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)