XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
CGATTATGGAAAACCTAGGAAAGAAAACAGGGACAACAGAAAAAAGCATA
ATCAACAGAATACAGGAGATGGAAGAGAGAATTTCAGGCTTAGAAGATAA
AGTAAAGAAAATGGTTAAGCTAAAAAAACTTCCTGACCAAAAAAAAAAAA
AAAAAAAAAAACTTCGAGGAAATGTGGGATGCTATGAAAAGACTTAATCT
AAAAATAACAGGATTAGAAGATGTTGAAGACGGTGTCTTTTGCCTTGCAG
AAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGC
ACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTT
CAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTT
ATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAA
GTATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGC
ACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCC
TTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTC
AATTCTATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAG
TTTTTATCACAATTGCTCTGTAGAN

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGACTGAGGAAAATTGTGAAATAATTAATG
TGTGCTGTTTTAAGCCCCTAAATTGTGACAATAGAATGTTAATGCAGGTG
GGGATGGCTAATGAGCCAGATTGCAGCAGATCAAGAGACTCTGAAGAAAT
TTATCCAGACTTATGAAATTGTCCTAATGTCTTGAGAAATGCATACAACT
TGAAGACAATTGGGAAATAGGTTGGTTTAGCAAGAATACCAAAACTAAGC
AATCAAATACAAGACCATGACTAACTATAAGAAAAAATAAAATGATGCAT
GGAAATAGAATGTACTGAGTCACTATAATGAAAAAAAAAACAAAAGACAA
AAGTCTAATGAATATAGTGGGACGATAGTGGGACGATGGAGAAGGGAGGT
GTATATGTGGGCAGAGAAATGAAGAGGATCTTTATACTCTGAAATATAGA
AAGGTTCAGGAGAAGTAATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATGTATATATAGTCTCTGAGG
AAGAAATCTCTCTNATTAGTGAGCTAATTCTTCTTTTATTTTTTGGTAAC
ATCACGGAGGACCCAACTTTTTAAAATACCTGATTGTGAGGCCTGGCAAA
GAGAATCTGCGAGTCAAGGATTTTTTTTGGAAACATGGCGAACTGA

Query= MSMg01no534_k12.g1 MSMg01no534_k12.g1 CHROMAT_FILE:
MSMg01no534_k12.g1 PHD_FILE: MSMg01no534_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:14 2005
         (518 letters)



>mm_chrX_165871661_165872578
          Length = 918

 Score =  870 bits (450), Expect = 0.0
 Identities = 463/474 (97%), Gaps = 11/474 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgactgaggaaaattgtgaaataattaatgtgtgctgttttaagcccctaaattgtgac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgactgaggaaaattgtgaaataattaatgtgtgctgttttaagcccctaaattgtgac 260

                                                                       
Query: 61  aatagaatgttaatgcaggtggggatggctaatgagccagattgcagcagatcaagagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatagaatgttaatgcaggtggggatggctaatgagccagattgcagcagatcaagagac 320

                                                                       
Query: 121 tctgaagaaatttatccagacttatgaaattgtcctaatgtcttgagaaatgcatacaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgaagaaatttatccagacttatgaaattgtcctaatgtcttgagaaatgcatacaac 380

                                                                       
Query: 181 ttgaagacaattgggaaataggttggtttagcaagaataccaaaactaagcaatcaaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaagacaattgggaaataggttggtttagcaagaataccaaaactaagcaatcaaata 440

                                                                       
Query: 241 caagaccatgactaactataagaaaaaataaaatgatgcatggaaatagaatgtactgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagaccatgactaactataagaaaaaataaaatgatgcatggaaatagaatgtactgag 500

                                                                       
Query: 301 tcactataatgaaaaaaaaaacaaaagacaaaagtctaatgaatatagtgggacgatagt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 501 tcactataatgaaaaaaaaaacaaaagacaaaagtctaatgaatatagtgggacgat--- 557

                                                                       
Query: 361 gggacgatggagaagggaggtgtatatgtgggcagagaaatgaagaggatctttatactc 420
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 --------ggagaagggaggtgtatatgtgggcagagaaatgaagaggatctttatactc 609

                                                                 
Query: 421 tgaaatatagaaaggttcaggagaagtaatatatatatatatatatatatatat 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgaaatatagaaaggttcaggagaagtaatatatatatatatatatatatatat 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space:   461264
Effective search space used:   461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)