Query= MSMg01no536_f17.b1 MSMg01no536_f17.b1 CHROMAT_FILE:
MSMg01no536_f17.b1 PHD_FILE: MSMg01no536_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:26 2005
(602 letters)
>mm_chrX_165382779_165383778
Length = 1000
Score = 1102 bits (570), Expect = 0.0
Identities = 594/602 (98%), Gaps = 2/602 (0%)
Strand = Plus / Plus
Query: 1 attcttccattattcctttgtatgaatcactttgtaataaacaagatggttttgtgccca 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttccattactaatttgtatgaatcactttgtaataaacaagatggttttgtgccca 260
Query: 61 cgacaatgacacatttnggttcttttaatacaaaatatattntgaaaagaaaaaaaataa 120
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 cgacaatgacacattt-ggttcttttaatacaaaatatatt-tgaaaagaaaaaaaataa 318
Query: 121 aagggaaacatttaggaggcaaatatccaaaaagcattttataaggcatacatttccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagggaaacatttaggaggcaaatatccaaaaagcattttataaggcatacatttccatg 378
Query: 181 cactgtagtttaaaagccctgttcagatttttgggcaagattattgaagagaagtttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cactgtagtttaaaagccctgttcagatttttgggcaagattattgaagagaagtttggt 438
Query: 241 tgctaaaaaacgggggaggatccttttatgccccagttactattcaaactgataattgaa 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 439 tgctaaaaaacgggggaggatccttttatgccccagttactatccaaactgataattgaa 498
Query: 301 agaaagcaaacatgacagtgtaattgacccagactcatgggaacgactgtgtcaggaggc 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 499 agaaagcaaacatgacagtgtaattgacccagactcatgggaatgactgtgtcaggaggc 558
Query: 361 aacatttacgcttgattagtgtattagtaacaggtgttggactgatttcagaaagttctc 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 559 aacatttacgcttgattagtgtattagtaacaggtattggactgatttcagaaagttctc 618
Query: 421 tgtggcctgaatgacctatatattagcaatttatcttcagggagaaatacaggtcctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtggcctgaatgacctatatattagcaatttatcttcagggagaaatacaggtcctgct 678
Query: 481 tttaaagaaattctaacagacttggggaaagtccacagacagcgtcaagtgagctaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tttaaagaaattctaacagacttggggaaagtccacagacagcgtcaagtgagctaatct 738
Query: 541 gagtctatgatggcttagatgatgccatgatatttcaggtccctagttgaagttacttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gagtctatgatggcttagatgatgccatgatatttcaggtccctagttgaagttacttag 798
Query: 601 tg 602
||
Sbjct: 799 tg 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1000
Length adjustment: 10
Effective length of query: 592
Effective length of database: 990
Effective search space: 586080
Effective search space used: 586080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_f17.g1 MSMg01no536_f17.g1 CHROMAT_FILE:
MSMg01no536_f17.g1 PHD_FILE: MSMg01no536_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:26 2005
(570 letters)
>mm_chrX_165523094_165524064
Length = 971
Score = 1089 bits (563), Expect = 0.0
Identities = 569/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 1 aggagcaaaggctgtaccaatcacttctgtatacaaagtttttttaag-ttttttattcc 59
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 771 aggagcaaaggctgtaccaatcacttctgtatacaaagtttttttaagtttttttattcc 712
Query: 60 aaacactgcggcaacagctacttttgatcctggaagacaacagatgacaaagttaactgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aaacactgcggcaacagctacttttgatcctggaagacaacagatgacaaagttaactgt 652
Query: 120 cttggttttctgtcttcctgttgtaagatgaaacaagtaaaaattgttgtgtaagataaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cttggttttctgtcttcctgttgtaagatgaaacaagtaaaaattgttgtgtaagataaa 592
Query: 180 ggtctgaaatttggacagcacaaaactatatgatcagtaaccaacaggtgtttgttgcaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggtctgaaatttggacagcacaaaactatatgatcagtaaccaacaggtgtttgttgcaa 532
Query: 240 ggaagaggacaaactagtgtgacttgacagaatagaaataagtatccatttagcttcttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggaagaggacaaactagtgtgacttgacagaatagaaataagtatccatttagcttcttc 472
Query: 300 aaaccaaatattaaataatgacaaggaaaatgaaaacaatggtaatgacaataatggttg 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 471 aaaccaaatattaaataatgacaaggaaaatgaaaacaatgataatgacaataatggttg 412
Query: 360 atgaaacgaaggagttggttggtgttgttatggcaataatgaagatggtgatgaggacat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atgaaacgaaggagttggttggtgttgttatggcaataatgaagatggtgatgaggacat 352
Query: 420 cgaggtggcttaatcaaactctcctataataaaatggatcataggctgtgctatttgcag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgaggtggcttaatcaaactctcctataataaaatggatcataggctgtgctatttgcag 292
Query: 480 tagtagctaataaaaaaatatcaccttcactgttaaaagtatagagatcatcttaacttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tagtagctaataaaaaaatatcaccttcactgttaaaagtatagagatcatcttaacttc 232
Query: 540 attctagatgtatttttaaatgttacaattg 570
|||||||||||||||||||||||||||||||
Sbjct: 231 attctagatgtatttttaaatgttacaattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space: 538160
Effective search space used: 538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
