GAGAGTTATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAAACTATTCTCTATCTGATGGAGGGCAAAAATTTCCATT
TAACTGTGTCTCACATCGAACTCCTCATTTGAAAGAGGCACCAGAATGAC
TCTTTTTGTTCCAGTGGTTCTCAAATTCACATCCTCTGTCGAAGAGGTCT
ATAAATGTCATCCAGTCATACCAGGGCTTCAGTGCCTCTCCCTCTCCCTA
TGGGAGCCTCAGACACACCACATCTAGTCATAAATATTTCCTCTTCTCCC
TGTGTCTATTGGGCAACAAAGCCTTCTCGAATGCCCATATTGGACTGAAA
TATTTCCTTTTTTTTTCAGTGGTGGACACATACCTACACTCTCTTGTAAA
GTGTAAATAGATCTTGTCTTATTGACTATGTGTGCCTGCTATATTACAAC
TGTCTAAGATTACTTCCAAACTTCTTCCTGTTACAAATATTCGGAGACAT
TCCTCCATTCAAGAAAAGTGGCCTTGCTCTTATGTCATCTGACTAAAGGT
TTCATAGACCAAAAATAACCATCCAACCTGTTGGAATACTGAAACAATTG
CTGCCTGCTTTCCACACACTACATAAAATATGTGGATATCCTAAATTCTA
CAAAAAAAGATTTGTAAGCAAATCAAGCAATACTGGGACTCCCTCTTCTC
CAGAAGGTATTTGCATTTTCACCAATGTGAAATGGGATTTCTTATTTATT
GAAAATAGCCAGAGG

CCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTGGGAAGAGGAGGTGGGACT
TGATGCATTAGGGACTAATAAGACATCACTGACATTACCGTTAGGCGAAG
AAGGTTTGGAGCCCTCTTTGTCTGATGGGGCCTGTTGCTTGACAAGAGAG
TTCTTCTCCAAAATGCTTTGGAGGAGAATTGGAAAGAATACAGTTATGTA
GGGTAGGGAACAAACTTTTGAACTCCTTCTGGAAGAGGAGGCATTTATGA
ATTTCTTTTAAGCACAGGTGGGAAGTCTATGGGATGCCTGGGCAGATGTG
CAATGTCCCATAGAGTCTTGGAAACTTTGCGTTAGTTCTCAAAACTTTTT
GGTGCATAAGGAATTGCCCTGAGAATTTGAAGATCCCAGATCTCCTTGGT
TAGATTGGGAAGGGTGTAGGGAACCTTGAATGTGTGGGGAAATTACCTGT
CCATGTTGTCCAGCAGACGATGGCCCAGGCACTGTGTTATCTTCTTTGAA
TTTGTGACTGGTATCTCCAGCCCTGTGTTTGGAAGATGCTGCAGGCACTC
TGGCACCCGACTGGTCAAAATCCCTAGGTTCTTCAAACCCAGTGGACATA
GGCTGGCTTCTTTTCACCTATCTATGCATGGACACAGCAGATGAGGCCAC
TCATTTTCTGGTGGAAAGTGGAAAAACAGAATGTCTGGTACCCTGCTCAC
GGGGTTACTCATG

Query= MSMg01no536_l01.g1 MSMg01no536_l01.g1 CHROMAT_FILE:
MSMg01no536_l01.g1 PHD_FILE: MSMg01no536_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:52 2005
         (582 letters)



>mm_chrX_121321761_121322742
          Length = 982

 Score =  460 bits (238), Expect = e-133
 Identities = 520/646 (80%), Gaps = 77/646 (11%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctgggaagaggaggtgggacttgatgcattagggactaata--agacatcactgacat 58
           ||||||| ||||||||  | ||||||| |||| | ||| || |  ||| |||| |||  |
Sbjct: 150 tcctggggagaggaggcagaacttgatacatttgagac-aa-aggagaaatcagtgatgt 207

                                                                       
Query: 59  taccgttaggcgaagaaggtttggagccctctttgtctgatggggcctgttg-------- 110
           |||| || || |||| ||||||||| ||||| ||||||||||||||||||||        
Sbjct: 208 tacctttgggagaaggaggtttggatccctccttgtctgatggggcctgttgtaggtccc 267

                                                                       
Query: 111 cttgacaaga-gagttcttctccaaaatgctttggaggagaattggaaagaatacagtta 169
           |||||| ||| ||| |||| ||||| ||||||||| ||||||||||||||| || |||||
Sbjct: 268 cttgaccagaggag-tcttgtccaacatgctttggtggagaattggaaagattagagtta 326

                                                                       
Query: 170 tgtagggtaggg---aacaaacttt-tgaactccttctggaagaggaggcatttatgaat 225
           ||||||||||||   |||   ||||  ||||||||||||||||||||||||| ||||| |
Sbjct: 327 tgtagggtagggggtaac---ctttgggaactccttctggaagaggaggcatgtatgagt 383

                                                                       
Query: 226 tt-cttttaagcacaggtgggaagtctatgggatgcctgggcagatgtgcaatgtcccat 284
           || ||||| ||||||  ||| |||||| ||||||||||||||||||||| ||||||||||
Sbjct: 384 ttcctttt-agcacaattggaaagtctttgggatgcctgggcagatgtggaatgtcccat 442

                                                                       
Query: 285 agagtcttggaaact-t-tgcgttagttctcaaaactttttgg--tgcata-----ag-- 333
           ||| ||||||||| | | || ||||||||| | ||| | ||||  || |||     ||  
Sbjct: 443 agactcttggaaa-tatctg-gttagttct-agaacatcttgggttg-atagggacagtc 498

                                                                       
Query: 334 ---ga--a-------ttg-----------ccctgagaat-ttg-----------aagatc 358
              ||  |       |||           ||||||| || |||           ||||||
Sbjct: 499 cctgagcatgttgggttgatagggagagtccctgagcatcttggggagaagtgaaagatc 558

                                                                       
Query: 359 ccagatctccttggttagattgggaagggtgt-agggaaccttgaatgtgtggggaaatt 417
           |||||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||||||
Sbjct: 559 ccagatctccttggctagatcgggaagggtgtga-ggaaccttgaatttgtggggaaatt 617

                                                                       
Query: 418 acctgtccatgttgtccagcagacgatggcccaggcactgtgttatcttctttgaa-ttt 476
           ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||
Sbjct: 618 acctgtccatgttgtccagcagaagatggcccaggcactttgtgatcttctttgaacttt 677

                                                                       
Query: 477 gtgactggtatctccagccctgtgtttggaagatgctgcaggcactctggcacccgactg 536
            ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 678 -tgactggaatctccagccccgtgtttggaagatgttgcaggcactctggcacccaactg 736

                                                         
Query: 537 gtcaaaatccctaggttcttcaaacccagtggacataggctggctt 582
           |||||||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 737 gtcaaaatccataggttcttcaaacacagtggacatagactggctt 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)