Query= MSMg01no537_i24.b1 MSMg01no537_i24.b1 CHROMAT_FILE:
MSMg01no537_i24.b1 PHD_FILE: MSMg01no537_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:57 2005
(662 letters)
>mm_chrX_65426927_65427988
Length = 1062
Score = 735 bits (380), Expect = 0.0
Identities = 392/396 (98%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 5 gaattcaattaaaaagttgcagaaattgaatgttaaaaattactaaatatctttttttcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaattcaattaaaaagttgcagaaattgaatgttaaaaattactaaatatctttttttcc 337
Query: 65 agattaaactttagtttaattgtgtcattattttagattacaacctcagactgaatctta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agattaaactttagtttaattgtgtcattattttagattacaacctcagactgaatctta 277
Query: 125 ctgagagcactgatgagaatctgattctaacacagtgtattcatttactaggtttatagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgagagcactgatgagaatctgattctaacacagtgtattcatttactaggtttatagg 217
Query: 185 ggtaagttccttttttttaattagtaattttcctcatttacatttccaatgctatcccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ggtaagttccttttttttaattagtaattttcctcatttacatttccaatgctatcccaa 157
Query: 245 aagtcccccataccctcccc-acccactcccctacccacccactcccacctcttggcccg 303
|||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 156 aagttccccataccctcccccacccactcccctacccacccactcccacttcttggcccg 97
Query: 304 ggtgttcccctgtactgaggcataaaaagtttgcatgaccaatgggcctctatttccact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggtgttcccctgtactgaggcataaaaagtttgcatgaccaatgggcctctatttccact 37
Query: 364 gatggccaactaggccatcttctgatatttatgcag 399
|||||||||||||||||||||||||||| |||||||
Sbjct: 36 gatggccaactaggccatcttctgatatatatgcag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_i24.g1 MSMg01no537_i24.g1 CHROMAT_FILE:
MSMg01no537_i24.g1 PHD_FILE: MSMg01no537_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:57 2005
(637 letters)
>mm_chrX_65262922_65263958
Length = 1037
Score = 1208 bits (625), Expect = 0.0
Identities = 634/637 (99%)
Strand = Plus / Plus
Query: 1 acttttaaaagtaccctgatgtagatcaggaagaccagagattgtggtcaggacagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttttaaaagtaccctgatgtagatcaggaagaccagagattgtggtcaggacagagat 260
Query: 61 agaggaaagttgtccctgtcctctaaagggaccatttttctgcatgtaattaagcaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaggaaagttgtccctgtcctctaaagggaccatttttctgcatgtaattaagcaaaac 320
Query: 121 acttcccttacggtgccattgcacatgccatatatcacatgtgttactccattacagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcccttacggtgccattgcacatgccatatatcacatgtgttactccattacagaaa 380
Query: 181 tgtcaatcacatttaattatgcatgattgccacattctggagtaaagaaccacacacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcaatcacatttaattatgcatgattgccacattctggagtaaagaaccacacacagt 440
Query: 241 tattacaatcaactcttatttttggtctaaaaatgatagttggggaaattaagtcaataa 300
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tatcacaatcaactcttatttttggtctaaaaatgatagttggggaaattaaatcaataa 500
Query: 301 accagacactgaaaataatatatataaacaatatttctatttctaaggcgatggagtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accagacactgaaaataatatatataaacaatatttctatttctaaggcgatggagtgct 560
Query: 361 cataaaaaaagggacctatcatgactgccctctgaaagacccaacaagcagctgaaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cataaaaaaagggacctatcatgactgccctctgaaagacccaacaagcagctgaaataa 620
Query: 421 tcagatgtagatatttgcacccaaccagtggacagaaacagctaacccatgttgttggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagatgtagatatttgcacccaaccagtggacagaaacagctaacccatgttgttggat 680
Query: 481 tagggaaggctgaaagaagctgagagcaaacctgtaggaggaccagcagtctcaattaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagggaaggctgaaagaagctgagagcaaacctgtaggaggaccagcagtctcaattaat 740
Query: 541 ctggacctgagatctctgaaacactggaccaccaaacaggcatcatataacagctgatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctggacctgagatctctgaaacactggaccaccaaacaggcatcatataacagctgatat 800
Query: 601 gaggcccccaatacatatacagtagaggacttccagg 637
|||||||||||||||||||||||||||||| ||||||
Sbjct: 801 gaggcccccaatacatatacagtagaggacatccagg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
