Query= MSMg01no538_e05.b1 MSMg01no538_e05.b1 CHROMAT_FILE:
MSMg01no538_e05.b1 PHD_FILE: MSMg01no538_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:52 2005
(691 letters)
>mm_chrX_113045139_113046229
Length = 1091
Score = 1321 bits (683), Expect = 0.0
Identities = 686/687 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaaagctacttgtaaaatgaagtcacttgggactagtcacaatctaaaacaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ggaattcaaagctacttgtaaaatgaagtcacttgggactagtcacaatctaaaacaaca 831
Query: 64 acataaaaataaaacaaaacattgttttatgtaatattgcattatttagggaaaggcatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 acataaaaataaaacaaaacattgttttatgtaatattgcattatttagggaaaggcatg 771
Query: 124 gcaagaaatgaacatatccaatagattttaattcaatgtgagtccaatattgtatgcaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gcaagaaatgaacatatccaatagattttaattcaatgtgagtccaatattgtatgcaaa 711
Query: 184 acacagtgcctatcacataaataaacctttaataaattatttttgagtgaacaaataaaa 243
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 acacagtgcctgtcacataaataaacctttaataaattatttttgagtgaacaaataaaa 651
Query: 244 ttatgtaaagcaaatatttgtggtttctaataataacccatattagtgcagcaagatatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttatgtaaagcaaatatttgtggtttctaataataacccatattagtgcagcaagatatt 591
Query: 304 ttcaaggaaaagtcagaactctggcatctctggtagggtagacttaggttctatcccaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttcaaggaaaagtcagaactctggcatctctggtagggtagacttaggttctatcccaat 531
Query: 364 ttgccagttaaagagatggggaactgtgtggaatagagagagaagatttatttagtgtgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttgccagttaaagagatggggaactgtgtggaatagagagagaagatttatttagtgtgg 471
Query: 424 aacagattaaaaacccagttttcccaggaccatcttcaggatactgacaaaacctatagg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aacagattaaaaacccagttttcccaggaccatcttcaggatactgacaaaacctatagg 411
Query: 484 cttaaatggagtaaggatcaggaaagcagacaataaaataatactgaccaagttatggtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cttaaatggagtaaggatcaggaaagcagacaataaaataatactgaccaagttatggtc 351
Query: 544 tcttaatcctctcagttccactcttacaactggtccaaagatgctctattgctgaggaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcttaatcctctcagttccactcttacaactggtccaaagatgctctattgctgaggaga 291
Query: 604 ataggctgaatttaaggataagattactggtctgtctgttactaattcatttctagggat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ataggctgaatttaaggataagattactggtctgtctgttactaattcatttctagggat 231
Query: 664 aatagtcttcttcattggtgtggtcat 690
|||||||||||||||||||||||||||
Sbjct: 230 aatagtcttcttcattggtgtggtcat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_e05.g1 MSMg01no538_e05.g1 CHROMAT_FILE:
MSMg01no538_e05.g1 PHD_FILE: MSMg01no538_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:52 2005
(654 letters)
>mm_chrX_112877634_112878688
Length = 1055
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 1 caaaaaagcaagaaatagtttttcctatggacaagcaatctaactgattatccaatacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaaaagcaagaaatagtttttcctatggacaagcaatctaactgattatccaatacta 260
Query: 61 atgagtcaggatatacacacaaataatgtaaaccaacttcattaatgcatttatttatgc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagtcaagatatacacacaaataatgtaaaccaacttcattaatgcatttatttatgc 320
Query: 121 attttgtgtgttgtttatatatctttttttatatattaataatatatatcaacaattaaa 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttgtgtcttgtttatatatctttttttatatattaataatatatatcaacaattaaa 380
Query: 181 tcatggccacaaatttgagagagccagggattgcatagaaaggctcatagggaagaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatggccacaaatttgagagagccagggattgcatagaaaggctcatagggaagaaagg 440
Query: 241 gatactgtaa-gtgtgtcattatactttaattttgaaaagtaaaagtaatataaaaagca 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatactgtaaagtgtgtcattatactttaattttgaaaagtaaaagtaatataaaaagca 500
Query: 300 caatagctagaaataagtacattaaaaatacagacattttctatggtaaaatttataaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatagctagaaataagtacattaaaaatacagacattttctatggtaaaatttataaaa 560
Query: 360 cacagaaaacattagacaatgaaaacttttcatgttcattgattgacagaactgatttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagaaaacattagacaatgaaaacttttcatgttcattgattgacagaactgatttta 620
Query: 420 ttgaaatggcatataactgaaaagtggccagatttaccagaattccattcaatatgttaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgaaatggcatataactgaaaagtggccagatttaccagaattccattcaatatgttaa 680
Query: 480 tgataattcttcataaaactaaagcaagtattctagaatgtgtgtgtgtatgtacatata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgataattcttcataaaactaaagcaagtattctagaatgtgtgtgtgtatgtacatata 740
Query: 540 tgaatgtacaatataggaacagatcaatcacatgaatgattagtggctataaaattcaca 599
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaatgtacaatacaggaacagatcaatcacatgaatgattagtggctataaaattcaca 800
Query: 600 tgaacaaaaatgaaggaaaataaaggaaataaaaattaacaattataaatgcagg 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgaacaaaaatgaaggaaaataaaggaaataaaaattaacaattataaatgcagg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
