XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTC
CTCGACAGTTACTGTTGTTATAAACATACATGGTCAATTCTTATTTATGA
ATTGTTAGGACAGCTTATTCCAAGCGCAAAGCTTTTCTTTGATTTTTATC
TTTCCTTCATAAATATGAGCTGTTATTAAATTCTTCAGTTAACAGGTAGA
AAAAAGCTAAAATGATTTTTTTTTAGTACTTCAGAGAGAATTTTGACAGG
AAAGATAATGAAACAGATCTCTCTAACCTATGACAAAATCTTAGAAACTC
TTGATATAGTTCTTATCTTTTTGTGTGTCTTCATTAATGTGGCACCCATG
TTATATGCATAGGCTAGGTTCTGAGGTATGACATCTATTTCTCAGGAAAT
TATAATTTGCCTAAAGGAAACAGATATGTAGACAAGCAATAAGCAGTTAA
ATAAGTATATGAGGAAAACCCTGTAAGAGCGGGGTGGGGGTATAAGAATT
TATAGTCCCCCCTTAAAAATCATCAGAATTAATAAAACTTGAGAAACTTA
ATAAAGAAAGAAATCAGGTTTTGAGAGAACCATTTATAATTGAACAGAGC
AGAGATATTATAATTTACTCTTATTATTTCACTGTCACTTAGTTATTAGT
TATTTATGACCTAGGCCACATCCAATGTATGACACAAAAATGGAGAGATT
GTGAGATGACCCAGCAGGTAAAGGCATTTCGTGCTTGCCCACACTAGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTATGACATTCCAAGGTTACAGTTTGGCCACAAAG
GAAAGCACTCTGACTAATACTATTTCTACTGGAAGTTTCTACCTTCATCA
GGTCTGGTACTTTGGGTGGAATAATTCTCAGTTTCAAAGGACTATCTTCC
TTGGTCTCACTTATGTTGCAGCATCCCAAAGCATTCTTACTATTCATCAG
TGAAGACAACTTCATTATCTACTTATAACCAAAATGCATGCAGACTGGAA
AACACCACCATTATATGGAGGTTTTATAATAAGTATTTAATAGTTGTTGT
TGTTCCCTAAAAGGTAAGCACAGATGAGATTCCTATAAGAAAGGTTGCGA
AGCAGAATACAGCTGGGAGTCAGAAAGCCCTTGATACATATGCTCAGAAA
ATACTTACACAAATAAAGCAAATATCATATTTGTGATGACTAATCAAATA
CCCATAACTAAAGTAAGTAATCAATGCCAAACAACTACATCAGAAAATTC
AAACACCTGAATAAAACCTAACCTGTGCTACTCCTCACAGGCTTTCCAGA
TAAGAGGACAGATAACAGCACAAGAAACAACTTGTAAGCAGAGTATGTAT
AGTACAGGATGATGAGGCTCACATATGAAATTCCAGTACTACAAAGGAAT
GCACACCCATACAATCCCCCTACTGCATAGGTGGCAGCAGTTGGATCAG

Query= MSMg01no538_m24.b1 MSMg01no538_m24.b1 CHROMAT_FILE:
MSMg01no538_m24.b1 PHD_FILE: MSMg01no538_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:33 2005
         (634 letters)



>mm_chrX_157381279_157382311
          Length = 1033

 Score = 1191 bits (616), Expect = 0.0
 Identities = 628/632 (99%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttactgttgttataaacatacatggtcaattcttatttatgaattgttaggacagctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttactgttgttataaacatacatggtcaattcttatttatgaattgttaggacagctta 260

                                                                       
Query: 61  ttccaagcgcaaagcttttctttgatttttatctttccttcataaatatgagctgttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccaagcgcaaagcttttctttgatttttatctttccttcataaatatgagctgttatt 320

                                                                       
Query: 121 aaattcttcagttaacaggtagaaaaaagctaaaatgatttttttttagtacttcagaga 180
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 aaattcttcagttaacaggtagaaaaaagctaaaatgatttttttt-agtacttcagaga 379

                                                                       
Query: 181 gaattttgacaggaaagataatgaaacagatctctctaacctatgacaaaatcttagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaattttgacaggaaagataatgaaacagatctctctaacctatgacaaaatcttagaaa 439

                                                                       
Query: 241 ctcttgatatagttcttatctttttgtgtgtcttcattaatgtggcacccatgttatatg 300
           |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 ctcttgatatagtttttatctttttgtgtgtcttcattaatgtagcacccatgttatatg 499

                                                                       
Query: 301 cataggctaggttctgaggtatgacatctatttctcaggaaattataatttgcctaaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cataggctaggttctgaggtatgacatctatttctcaggaaattataatttgcctaaagg 559

                                                                       
Query: 361 aaacagatatgtagacaagcaataagcagttaaataagtatatgaggaaaaccctgtaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaacagatatgtagacaagcaataagcagttaaataagtatatgaggaaaaccctgtaag 619

                                                                       
Query: 421 agcggggtgggggtataagaatttatagtccccccttaaaaatcatcagaattaataaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agcggggtgggggtataagaatttatagtccccccttaaaaatcatcagaattaataaaa 679

                                                                       
Query: 481 cttgagaaacttaataaagaaagaaatcaggttttgagagaaccatttataattgaacag 540
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttgagaaaattaataaagaaagaaatcaggttttgagagaaccatttataattgaacag 739

                                                                       
Query: 541 agcagagatattataatttactcttattatttcactgtcacttagttattagttatttat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agcagagatattataatttactcttattatttcactgtcacttagttattagttatttat 799

                                           
Query: 601 gacctaggccacatccaatgtatgacacaaaa 632
           ||||||||||||||||||||||||||||||||
Sbjct: 800 gacctaggccacatccaatgtatgacacaaaa 831


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space:   638352
Effective search space used:   638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)