TCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTAAGCCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAA
CTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGA
AAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAT
ACCTTGGCGTGACTCTAACCAAGGAAGTGAAAGATCTGTATGATAAGAAC
TTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATCAAAAGA
TATCCCATGCTCATGGAATGGGAGGATCAACATTGTAAAAATGGCCATCT
TGCCAAAAGCAATCTGCAGATTCAATGCAATCCCCATCAAAATTCCAACT
CAATTCTTCAACGAATTAGAAAGGCCAATTGGAAGATTCATCTGGAATAA
CAAAAAAACGAGGATAGCAAAATCTCTTCTCAAGGATAAAAGAACCTCTG
GTAGAATCACCAAGCTGGACCTAAAACTGTACTACAAAGCAATTGTGATC
AAAACTGCATGGTACTGTTATAGTGACAGACAAGTAGACCAATGAACAGA
ATTCAAGACCCAGAGATGAATCCACACACCTATGGTCACTTGATCTTTGA
CAAGGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAAT
GGTGCTGGCACAACTGGCAGTTATCATGTAGAAGAATGAGAATAGATCCA
TTTCTATCTCCTTGTACTAGGGTCAAATCTAAGTGGAA

CCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAACTGTCTCAACTATTCCCAGAGA
CTGATCCATCATCCAGGCAGCATACATAGGCTGGTCTGAGGCCACCAGTA
CATATGTAGCAGATGACTGCCTGGTCTGGACTCAGTGGGAGAAGATGTGC
CTAATCCTGTAGACACTTAGAAACAGGGAGGGAGAATTTGGGGGTAGGGA
GAGGAGAAGCACCCTCTTGGAGTCAAGGTGGGGAGTTGGATGGGGAACTA
TGGGAGGGGGAATGAACCAAGAGCAATCGCTGGAATGTAAATAAATAAAA
TAATTATTTGAAAAAAAGTCAAATATGATGGCATGTACTGTTGTCTAAAA
AGTATCTGAATCAAATCAAAGCTTTCATTTCTAATTAACTTCATAATTTT
ACACTAGCAGAAAATGAAAGCTAAGATACTAAGACCTAACAATCATGTGG
ATTGATAATATTTTGACATAGTCACTTGATATGGCTTATGCTGCTTTGTG
GTAGAGTTACTCCCTGGGATGTCATAGGTCATTAGGTAGCAATAGTATAA
GCATGTATGTGTATAGATCAGAGTAAACATCACTAATTGTGCTTGTCATT
TGCTTGACTCAGAACTCCAGTCACCTCAATAGAGGTCTTGGCAGTAAGGC
CTTTGTTGCATATTAACAGCTTAGTCATATTTAAGGACAGATTATATATG
CTCTATGAGTCATTTATTGGG

Query= MSMg01no541_e19.g1 MSMg01no541_e19.g1 CHROMAT_FILE:
MSMg01no541_e19.g1 PHD_FILE: MSMg01no541_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:53 2005
         (590 letters)



>mm_chrX_60976255_60977247
          Length = 993

 Score = 1100 bits (569), Expect = 0.0
 Identities = 586/593 (98%), Gaps = 3/593 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caactgtctcaactattcccagagactgatccatcatccaggcagcatacataggctggt 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 caactgtctcaactattcccagagactgaaccatcatccaggcagcatacataggctggt 260

                                                                       
Query: 61  ctgaggccaccagtacatatgtagcagatgactgcctggtctggactcagtgggagaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaggccaccagtacatatgtagcagatgactgcctggtctggactcagtgggagaaga 320

                                                                       
Query: 121 tgtgcctaatcctgtagacacttagaaacagggagggagaatttgggggtagggagagga 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcctaatcctgtaggcacttagaaacagggagggagaatttgggggtagggagagga 380

                                                                       
Query: 181 gaagcaccctcttggagtcaaggtggggagttggatggggaactatgggagggggaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcaccctcttggagtcaaggtggggagttggatggggaactatgggagggggaatga 440

                                                                       
Query: 241 accaagagcaatcgctggaatgtaaataaataaaataattatttgaaaaaaagtcaaata 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accaagagcaatcactggaatgtaaataaataaaataattatttgaaaaaaagtcaaata 500

                                                                       
Query: 301 tgatggcatgtactgttgtctaaaaagtatctgaatcaaatcaaagctttcatttctaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatggcatgtactgttgtctaaaaagtatctgaatcaaatcaaagctttcatttctaat 560

                                                                       
Query: 361 taacttcataattttacactagcagaaaatgaaagctaagatactaagacctaacaatca 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 taacttcataattttacactagcagaaaatgaaagctaagatactaagacctaacaatta 620

                                                                       
Query: 421 tgtggattgataatattttgacatagtcacttgatatggcttatgctgctttgtggtaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtggattgataatattttgacatagtcacttgatatggcttatgctgctttgtggtaga 680

                                                                       
Query: 481 gtt---actccctgggatgtcataggtcattaggtagcaatagtataagcatgtatgtgt 537
           |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttgttactccctgggatgtcataggtcattaggtagcaatagtataagcatgtatgtgt 740

                                                                
Query: 538 atagatcagagtaaacatcactaattgtgcttgtcatttgcttgactcagaac 590
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atagatcagagtaaacatcactaattgtgcttgtcatttgcttgactcagaac 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 993
Length adjustment: 10
Effective length of query: 580
Effective length of database: 983
Effective search space:   570140
Effective search space used:   570140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)