Query= MSMg01no541_j08.b1 MSMg01no541_j08.b1 CHROMAT_FILE:
MSMg01no541_j08.b1 PHD_FILE: MSMg01no541_j08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:17 2005
(628 letters)
>mm_chrX_50265950_50266981
Length = 1032
Score = 1172 bits (606), Expect = 0.0
Identities = 621/628 (98%), Gaps = 4/628 (0%)
Strand = Plus / Plus
Query: 5 gaattccagagacttggccaaggacaatcggaggggggggggaccccgactttctggctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagagacttggccaaggacaatcggaggggggggggaccccgactttctggctg 264
Query: 65 aaaggaacctactgaagtgttgggaaggaagagactttttcgagtttatccagcgccttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaggaacctactgaagtgttgggaaggaagagactttttcgagtttatccagcgccttg 324
Query: 125 gttagagggagatctgggaggctagtgtgcgattggggaatacataacggagggaatccg 184
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 gttagagggagatctaggaggctagtgtgcgattggggaatacataacggagagaatccg 384
Query: 185 ctctgtttcctgtctggtcctttattacatgggcgaacagcacggcgttcttttgcagtt 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctgtttcctgcctggtcctttattacatgggcgaacagcacggcgttcttttgcagtt 444
Query: 245 tctattcgtttcgatattctgtgtgaaagtgaaaaacaaatcttttgatgtttgaaaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctattcgtttcgatattctgtgtgaaagtgaaaaacaaatcttttgatgtttgaaaagc 504
Query: 305 ctttaattttcctctggttcctacgtaatatcgggtcttattcatacagttcaaatttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttaattttcctctggttcctacgtaatatcgggtcttattcatacagttcaaatttct 564
Query: 365 tcactaccctttggcttgaaacaactggaaaattcctttagtttccttttgaataaccgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcactaccctttggcttgaaacaactggaaaattcctttagtttccttttgaataaccgc 624
Query: 425 aaaaaaaaaaaaaaa----gcagtgcgaagcatgtaataatatcgtgcaaccaaattcag 480
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaaaaaaaaaaaaaaaaagcagtgcgaagcatgtaataatatcgtgcaaccaaattcag 684
Query: 481 gtgcccttccggtacatttcctattcatttatttctcttcactgcaactttgctgagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgcccttccggtacatttcctattcatttatttctcttcactgcaactttgctgagaga 744
Query: 541 aagaccgtgttatctttggaggatcgcacttatatctgtgaatttcaactggcttgcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagaccgtgttatctttggaggatcgcacttatatctgtgaatttcaactggcttgcatg 804
Query: 601 cggaaggtttttcatcttccggaactgc 628
||||||||||||||||||||||||||||
Sbjct: 805 cggaaggtttttcatcttccggaactgc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1032
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1022
Effective search space: 631596
Effective search space used: 631596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_j08.g1 MSMg01no541_j08.g1 CHROMAT_FILE:
MSMg01no541_j08.g1 PHD_FILE: MSMg01no541_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:18 2005
(649 letters)
>mm_chrX_50441041_50442089
Length = 1049
Score = 1239 bits (641), Expect = 0.0
Identities = 647/649 (99%)
Strand = Plus / Minus
Query: 1 tcaccctctagtcccagttccttgttgtttttatttggagagaggatgttttgcagaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tcaccctctagtcccagttccttgttgtttttatttggagagaggatgttttgcagaatt 790
Query: 61 tgtgggtaaagggggattggggtgaaattgaggttaagaattcatagggaacaagaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tgtgggtaaagggggattggggtgaaattgaggttaagaattcatagggaacaagaggta 730
Query: 121 aagactgaagccattgctcctgtgttgagaggtcaccgtgcaggcaattcattaaatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aagactgaagccattgctcctgtgttgagaggtcaccgtgcaggcaattcattaaatgta 670
Query: 181 tagtaattttccatcactgcagtatgaaaatcagcacatccaacaaaatatttcacacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tagtaattttccatcactgcagtatgaaaatcagcacatccaacaaaatatttcacacct 610
Query: 241 aggcaaagtcaaacccatcttctgtgtggccctaagtggtaattttctggaaggaaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aggcaaagtcaaacccatcttctgtgtggccctaagtggtaattttctggaaggaaaact 550
Query: 301 tatttgaaacaaatgtcagaacagaaatgttgcttaggagggacatagagaagccatagc 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 549 tatttgaaacaaatgtcagaacagaaatgttgcttaggagggacctagagaagccatagc 490
Query: 361 acttaaggttcataactatcacctacgaagactacactccccagcctcagaccctctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acttaaggttcataactatcacctacgaagactacactccccagcctcagaccctctgaa 430
Query: 421 ggttagcgtgcaggtccaggctttgtgttcatctacctgtgtatataggtgtcttctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggttagcgtgcaggtccaggctttgtgttcatctacctgtgtatataggtgtcttctctt 370
Query: 481 gtttgctttcatggcaaaacctggtgctaatatttctttcatatactacatgaaaaatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtttgctttcatggcaaaacctggtgctaatatttctttcatatactacatgaaaaatca 310
Query: 541 aagtaaaataatggatccattgtatagcacactgcggcttggtgacaaaacatgaggagg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 309 aagtaaaataatggatccattgtatagcacactgcggcttggtgacaaaacaagaggagg 250
Query: 601 atctcaaaatgatggttgggattagatctggatagccattgaggagctt 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atctcaaaatgatggttgggattagatctggatagccattgaggagctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
