NAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCTGATGGTCGAGGGTGTGGATCCTCATTGGACCTATCTTTAT
AATGGGAAAATAAAGCAGGGGTTGTGCTCATCAGAGAGACTAATACTTGT
GGAATGCTAGTAAGACAATCCTGAGTATTCTAGCACTAAGACCTGTGAAG
TGACTCCTGTCTCGGCCAAGGAGGAATACATGGTATTAGGGTGGTAGGAA
CTAATCCACCTCATTTTCCATTTCCCTGTCAGAATATTTTAGATCTCCTT
TCTCAGCCTTGCATTTAGTGAAGGAAAGTCAGTCGTGCTGTGTTTGAATG
GGCTTTCTTCATGTCGAGAAGGAATATCACAGTGTTCACTGTTGTCTTTT
ACAGGCAGAAACTTTGTCAGGACTATTCTCTTCAGTTTACAAATTTTGAG
ATAGGAAGTTAACTTTCGGAATGCATTCCAACTTTCAAAAAAAGGCCCAA
ACTCTCCTGGAATTAGGTTTTCTTTTAAGGAGCCTTTTTCCCCCCCAAAG
TGAACAAAACTTTCTCCCAAATTTTTGGGGGAAGAAAAAAAAAATTTCCT
TTAAAAAAAAAGGTGTTTTTTTTTGGGAAAAAAAAACGCCCCCCCCCCCG
CGGTTTTTTTTCCCCCCCCCCTCCGGGGGAAAAAAACACTGATTGTTTTT
TGTGGGTTTCTTCCTTCTTTTTCGCGGGGGGGGTTTAAGAAAATCTTTTC
TTCTTTTCCACACAAAA

TCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTCTGCTATCCTTCCAGATACTCAT
AATACCAAAGACCACAGAAACCGTGAGAGGAGTTTGAAAGGGAAAGCCTT
AGAACTCAGAGCCCCTCCTCTTAATCTTAAGAAAGGGAGAGGGTCAGTAG
CAGCTGCCCACAATCAGCAGCTGAAAGCAGGATTAAGATAAGCTGGAGCT
GACCAGAGTAGAACTCCAGTTGCTGGAGGATGACCTGAGCAACAAGTACG
GTAAGAGCAAGGTAGGAGACCTCAGAACCATCTAACAAGTGTCCAGAGCC
CTGAGGGCTGTACAGTGGCCAACTACAAAGAAATGATTTTTATAGCAAGT
GGTCAATGATAATGAAAATAAAACCAAGCTCTTATGGCAAGGAGTTGGGG
GAGTGAGTTGTAGGAAAGTTAAGAAGTGGGTTCTATGGAATTGGGGCTCT
GACTGTTAGGTCCACAATGAACCAGATATGGGACATAATGACCAGGTCAG
AACATGCTACTGAAAACCAATTTTGCCTTAATATCTTGACCCATAGAAGA
GAAAACAACTTGGCATTTCTACTTCTATATGTATGTAAAGGATAAACTGA
TAGGCATGGCCTGCAAATGTGAACGTATTTTGTAGATATGATAAATGTTT
AAATCAGGTGGATTACCCATAATCAGGTCACTATCCTGCAGTCAATTGAA
AGCAT

Query= MSMg01no542_e16.g1 MSMg01no542_e16.g1 CHROMAT_FILE:
MSMg01no542_e16.g1 PHD_FILE: MSMg01no542_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:17 2005
         (625 letters)



>mm_chrX_70128535_70129560
          Length = 1026

 Score = 1195 bits (618), Expect = 0.0
 Identities = 624/626 (99%), Gaps = 1/626 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctgctatccttccagatactcataataccaaagaccacagaaaccgtgagaggagtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tctctgctatccttccagatactcataataccaaagaccacagaaaccgttagaggagtt 260

                                                                       
Query: 61  tgaaagggaaagccttagaactcagagcccctcctcttaatcttaagaaagggagagggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaagggaaagccttagaactcagagcccctcctcttaatcttaagaaagggagagggt 320

                                                                       
Query: 121 cagtagcagctgcccacaatcagcagctgaaa-gcaggattaagataagctggagctgac 179
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cagtagcagctgcccacaatcagcagctgaaaagcaggattaagataagctggagctgac 380

                                                                       
Query: 180 cagagtagaactccagttgctggaggatgacctgagcaacaagtacggtaagagcaaggt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagtagaactccagttgctggaggatgacctgagcaacaagtacggtaagagcaaggt 440

                                                                       
Query: 240 aggagacctcagaaccatctaacaagtgtccagagccctgagggctgtacagtggccaac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggagacctcagaaccatctaacaagtgtccagagccctgagggctgtacagtggccaac 500

                                                                       
Query: 300 tacaaagaaatgatttttatagcaagtggtcaatgataatgaaaataaaaccaagctctt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacaaagaaatgatttttatagcaagtggtcaatgataatgaaaataaaaccaagctctt 560

                                                                       
Query: 360 atggcaaggagttgggggagtgagttgtaggaaagttaagaagtgggttctatggaattg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggcaaggagttgggggagtgagttgtaggaaagttaagaagtgggttctatggaattg 620

                                                                       
Query: 420 gggctctgactgttaggtccacaatgaaccagatatgggacataatgaccaggtcagaac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggctctgactgttaggtccacaatgaaccagatatgggacataatgaccaggtcagaac 680

                                                                       
Query: 480 atgctactgaaaaccaattttgccttaatatcttgacccatagaagagaaaacaacttgg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgctactgaaaaccaattttgccttaatatcttgacccatagaagagaaaacaacttgg 740

                                                                       
Query: 540 catttctacttctatatgtatgtaaaggataaactgataggcatggcctgcaaatgtgaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catttctacttctatatgtatgtaaaggataaactgataggcatggcctgcaaatgtgaa 800

                                     
Query: 600 cgtattttgtagatatgataaatgtt 625
           ||||||||||||||||||||||||||
Sbjct: 801 cgtattttgtagatatgataaatgtt 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space:   624840
Effective search space used:   624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)