GCGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCACATTTTTACCTCTTGATATGTTAATAAAATATGGGGAA
ATATATCTTCTGTCAAACTTCATGCTTTCAATAACTTCTAATTAATCACT
CAGGGTTTTTCTATCCTTCGCTGTGATGACACCCTTTCTTCCAACCTTTT
TCGTTGCATCAGAAATGATGTTTCCAATGTCTTTGTTCCCATTTTCAGAA
ATTGTAGCAATATGATCAATTTCTTCAGGGGTTGTTACGGATTTAGACTG
TATTTTAAGTTCAGCAATTACAACATCTTTTGATAACATCATACATCTCT
GGATTTCCACTGGATTAGCCACTTTACTGACATTCTAAAAGCCCACCTTG
GCAATAGACACTGCCAGAACACTAATAATGATAGTGTCATCACCAGCCTC
CTTGCTCGTGTTATTGGCAAAATCCTGGACAAATTGAACCAATATATTTT
TGTATTCATCATCTAAATCAATTTACTTTGCAACAGTCTTGCAATAATAC
CCCTATTTTTTCGTAATTTGGGATTTCCCCAACTCTGCTCAATGATCACA
GTCCTTCCCCTTGGCTCCACTTTAACAGCTATTACCATCTGCTAGAAAGT
CTACACCTTGAAATCCCAATGCTTAAGCATCCACTACATAATTTCACATT
GTTGGCTTAATCCTCCAATGACACGAGGATTCAATGTCCTATAATCTTGC
T

NCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGAAGAAAGAAAAATAAAAAG
TAGAAAATAAGCCCCTCCCCTTTTTCTTTTGCCAGGAATCACAAAACTAG
GTGAACTGATGCTTAATCCTCTCAAGGAACTGAGTGTCCAACTCAGTTGA
GTGGCTGCGGGGGTGGGGTGCGGTGGCACAAAAACTTCCTGTGACTGTGT
CCTTCAACCTGTGTGAAAAATTCCCATACCCCTATAAAAGACCCTTTCTG
AAGTCACATCCTTTTCTTTAAACTGACACCCCTTCCCAGAAGTCTTTTTA
CCTTGCCCCAGCGAATCACGTGGTCCAAGACAGCGTCATCAACTAATATC
CAGAGTTTGGTGAGAAAGTGAGGAACCATTGTCTTGCGAAATTGCTCCAT
GTTTTGGGATTTCACTGCTTTAAGAAAATGTCCGTCCTGGACAATTGTAA
GCAGCAAGGAAAACCTGTGCTACTCCAGCTATTACCAGGAGAGCCAGCAG
CAGTTTTCTGTGACAAAAGGCCGTTAACGGCCCTCCCTCAGAACTTTGCT
TGGAGGCGGGTCTGAATTGCCCAGGGGGCAATTTTTATTGGCTGGTTATA
GTTCTGCAGTACCTCTGGCACGTGACTGTATCAGGGGAACTTCCGGTAGA
GGAACACCTTTATAGTGTGAGGAAAAATGAGGCATGATAGAGCAGTAGGG
GGCGC

Query= MSMg01no543_k01.g1 MSMg01no543_k01.g1 CHROMAT_FILE:
MSMg01no543_k01.g1 PHD_FILE: MSMg01no543_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:04 2005
         (672 letters)



>mm_chrX_93562688_93563760
          Length = 1073

 Score = 1270 bits (657), Expect = 0.0
 Identities = 669/673 (99%), Gaps = 1/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagaaagaaaaataaaaagtagaaaataagcccctcccctttttcttttgccaggaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaagaaagaaaaataaaaagtagaaaataagcccctcccctttttcttttgccaggaat 260

                                                                       
Query: 61  cacaaaactaggtgaactgatgcttaatcctctcaaggaactgagtgtccaactcagttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaaactaggtgaactgatgcttaatcctctcaaggaactgagtgtccaactcagttg 320

                                                                       
Query: 121 agtggctgcgggggtggggtgcggtggcacaaaaacttcctgtgactgtgtccttcaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtggctgcgggggtggggtgcggtggcacaaaaacttcctgtgactgtgtccttcaacc 380

                                                                       
Query: 181 tgtgtgaaaaattcccatacccctataaaagaccctttctgaagtcacatccttttcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtgaaaaattcccatacccctataaaagaccctttctgaagtcacatccttttcttt 440

                                                                       
Query: 241 aaactgacaccccttcccagaagtctttttaccttgccccagcgaatcacgtggtccaag 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccgacaccccttcccagaagtctttttaccttgccccagcgaatcacgtggtccaag 500

                                                                       
Query: 301 acagcgtcatcaactaatatccagagtttggtgagaaagtgaggaaccattgtcttgcga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagcgtcatcaactaatatccagagtttggtgagaaagtgaggaaccattgtcttgcga 560

                                                                       
Query: 361 aattgctccatgttttgggatttcactgctttaagaaaatgtccgtcctggacaattgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattgctccatgttttgggatttcactgctttaagaaaatgtccgtcctggacaattgta 620

                                                                       
Query: 421 agcagcaaggaaaacctgtgctactccagctattaccaggagagccagcagcagttttct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcagcaaggaaaacctgtgctactccagctattaccaggagagccagcagcagttttct 680

                                                                       
Query: 481 gtgacaaaaggccg-ttaacggccctccctcagaactttgcttggaggcgggtctgaatt 539
           |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgacaaaaggccgattaaaggctctccctcagaactttgcttggaggcgggtctgaatt 740

                                                                       
Query: 540 gcccagggggcaatttttattggctggttatagttctgcagtacctctggcacgtgactg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcccagggggcaatttttattggctggttatagttctgcagtacctctggcacgtgactg 800

                                                                       
Query: 600 tatcaggggaacttccggtagaggaacacctttatagtgtgaggaaaaatgaggcatgat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tatcaggggaacttccggtagaggaacacctttatagtgtgaggaaaaatgaggcatgat 860

                        
Query: 660 agagcagtagggg 672
           |||||||||||||
Sbjct: 861 agagcagtagggg 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1073
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1063
Effective search space:   703706
Effective search space used:   703706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)