Query= MSMg01no543_k09.b1 MSMg01no543_k09.b1 CHROMAT_FILE:
MSMg01no543_k09.b1 PHD_FILE: MSMg01no543_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:05 2005
(445 letters)
>mm_chrX_81062468_81063312
Length = 845
Score = 702 bits (363), Expect = 0.0
Identities = 387/395 (97%), Gaps = 2/395 (0%)
Strand = Plus / Minus
Query: 52 attaaaaacttgaaaaatacaat-aaaatataatagacttttaatattgatagatcactc 110
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 845 attaaaaacttgaaaaatacaataaaaatataatagacttttaatattcatagatcactc 786
Query: 111 agggaactgtaatacacacctgtttcccctttattttggaaatagatactggagaaaaaa 170
|||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 785 agggaactgtaatacacacctgtttcccctctattttggaaatagatacaggag-aaaaa 727
Query: 171 aagatttcaaggctattcttagatatataataattttgaggacatcttacgaaaaatgaa 230
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 726 aagatttcaaggctattcttagatatataataattttgaggacatcttaggaaaaatgaa 667
Query: 231 actttgtctcaaaaataataatttgataagttatctgtacatgggtatgtatttttcaaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 actttgtctcaaaaataataatttgataagttatctgtacatgggtatgtatttttcaaa 607
Query: 291 tatgtgtatgtatctatagaaagttatatcaaacagtgaataagcaaccacatgttttaa 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tatgtgtatgtatctatagaaagttatatcaaacagtgaataagcaaccacatgttttaa 547
Query: 351 ttccgtgtttgaaaatattcagaagactatattcaacattgcttataaattattcaagtg 410
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 546 ttccgtgtttgaaaatattcagaagactatattcaacatcgcttataaattattcaggtg 487
Query: 411 aattagtattgaatttggtgaagatactatttaaa 445
|||||||||||||||||||||||||||||||||||
Sbjct: 486 aattagtattgaatttggtgaagatactatttaaa 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_k09.g1 MSMg01no543_k09.g1 CHROMAT_FILE:
MSMg01no543_k09.g1 PHD_FILE: MSMg01no543_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:05 2005
(612 letters)
>mm_chrX_80929176_80930191
Length = 1016
Score = 1127 bits (583), Expect = 0.0
Identities = 607/617 (98%), Gaps = 6/617 (0%)
Strand = Plus / Plus
Query: 1 gagttagaaataagaaagtaggcaataaaagagatgcagtatttggaatgagtgagacag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 gagttagaaataagaaagtaggcaataaaagagatgcagtatttagaatgagtgagacag 260
Query: 61 ataagctttgagaatgccttaaaatcaaatagtgcttttagtgctttgcaagctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataagctttgagaatgccttaaaatcaaatagtgcttttagtgctttgcaagctctctct 320
Query: 121 caacctaaggatgattaaaattatacacacttactgctatgaagtcccacttgaatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caacctaaggatgattaaaattatacacacttactgctatgaagtcccacttgaatttct 380
Query: 181 atcctttgcccctgtaagtacttaatgaaattttgatgcctatgtaagtaaagataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctttgcccctgtaagtacttaatgaaattttgatgcctatgtaagtaaagataaaca 440
Query: 241 atacactcaggacaaaaatatcatactattaccagagaaccaaagctcatctgtgtttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacactcaggacaaaaatatcatactattaccagagaaccaaagctcatctgtgtttct 500
Query: 301 gtaatgcctggcagaatacttaagaaataattgcttcagaaatgttttgtcagaacatgt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaatgcctggcagaatacttaagaaataattgcttcagaaatgttttgtcagaacatgt 560
Query: 361 gttgtaataattctcactacatcatttcattttccatcctcatcat--cata---ttttg 415
|||||||||||||||||||||||||||||||||||||||||||||| | || |||||
Sbjct: 561 gttgtaataattctcactacatcatttcattttccatcctcatcattgc-tacctttttg 619
Query: 416 acaagggcaaaataatttgacaactgaagcaggcaataaaaaatatgtgtaactgcaaaa 475
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acaagggaaaaataatttgacaactgaagcaggcaataaaaaatatgtgtaactgcaaaa 679
Query: 476 agcaactcataaagatggacaaggaatatttttatgaagtaacttacatagatctatatc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agcaactcataaagatggacaaggaatatttttatgaagtaacttacatagatctatatc 739
Query: 536 tttttcattgtcttaagttttcttctctgtcctcatcacactatgatttctttattcaag 595
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 740 tttttcattgtcttaagttttcttctctgtcctcatcacagtatgatttctttattcaag 799
Query: 596 aacctccattgatattt 612
|||||||||||||||||
Sbjct: 800 aacctccattgatattt 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1016
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1006
Effective search space: 605612
Effective search space used: 605612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
