Query= MSMg01no544_f15.b1 MSMg01no544_f15.b1 CHROMAT_FILE:
MSMg01no544_f15.b1 PHD_FILE: MSMg01no544_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:59 2005
(636 letters)
>mm_chrX_127639417_127640452
Length = 1036
Score = 1191 bits (616), Expect = 0.0
Identities = 628/632 (99%)
Strand = Plus / Minus
Query: 5 gaattcccagccttacaagtcagttctcaggtatattggcatcaagattaatacacatgc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gaattcccagccttaaaagtcagttctcaggtatattggcatcaagattaatacacatgc 777
Query: 65 tactcccaagagccaagagtaacatcatctcacatccaagagattaagacaagccatctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tactcccaagagccaagagtaacatcatctcacatccaagagattaagacaagccatctg 717
Query: 125 agaaacacaccactggttgctgtggaactcagtacttcagccactgaagatcatttggaa 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 716 agaaacacaccactggttgctctggaactcagtacttcagccactgaagatcatttggaa 657
Query: 185 gttgtaagataagctggaaaaacttgtctaagctgcttggtggctggtactcctctcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gttgtaagataagctggaaaaacttgtctaagctgcttggtggctggtactcctctcaca 597
Query: 245 actgctggaagctaaggattacaacagtagccaatttctctgccattgatgatgacagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 actgctggaagctaaggattacaacagtagccaatttctctgccattgatgatgacagac 537
Query: 305 cagaacaaaaagagtcagacctaagtaaccagagtcgtaagtcattggcattgaaacccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cagaacaaaaagagtcagacctaagtaaccagagtcgtaagtcattggcattgaaacccc 477
Query: 365 aaagcaataggcatgtagctatcaaagcttatagctctaagtcatctagtctagctacaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aaagcaataggcatgtagctatcaaagcttatagctctaagtcatctagtctagctacaa 417
Query: 425 ggcctcaggcacccaaaggcccaggattgccactacaagagcttctcacataatcttgat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggcctcaggcacccaaaggcccaggattgccactacaagagcttctcacataatcttgat 357
Query: 485 ttgtaaatatgaagaacagaagggcccaatctggaaaattccttgtagcagcatctacat 544
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 356 ttgtaaatatgaagaacagaagggtctaatctggaaaattccttgtagcagcatctacat 297
Query: 545 gcttatgataatgtaacaggaatatggaaaccttttattcaaattcttccaacaataaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gcttatgataatgtaacaggaatatggaaaccttttattcaaattcttccaacaataaca 237
Query: 605 tgccactttaataaccattttctagaattcaa 636
||||||||||||||||||||||||||||||||
Sbjct: 236 tgccactttaataaccattttctagaattcaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_f15.g1 MSMg01no544_f15.g1 CHROMAT_FILE:
MSMg01no544_f15.g1 PHD_FILE: MSMg01no544_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:59 2005
(653 letters)
>mm_chrX_127523041_127524093
Length = 1053
Score = 1249 bits (646), Expect = 0.0
Identities = 652/654 (99%), Gaps = 2/654 (0%)
Strand = Plus / Plus
Query: 1 attcagaccattattaaatatataacaaggaatagaatcagagttcagtagcaaagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcagaccattattaaatatataacaaggaatagaatcagagttcagtagcaaagcact 260
Query: 61 agagacatacgttctggttaataattatccaccaatcaagagttttagttcagttattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagacatacgttctggttaataattatccaccaatcaagagttttagttcagttattca 320
Query: 121 accagttatgactatgaactttctgttacagtcgaattaagtccatattttagcatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accagttatgactatgaactttctgttacagtcgaattaagtccatattttagcatttaa 380
Query: 181 tccacaaaataatcacaaatcacagtttgcaatattttgctgatttgcaatacagactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccacaaaataatcacaaatcacagtttgcaatattttgctgatttgcaatacagactga 440
Query: 241 gcaatcctaatttgagagaaacccttatgt-tagattgcttctttaagtacctcacattg 299
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 441 gcaatcctaatttgagagaaacccttatgtct-gattgcttctttaagtacctcacattg 499
Query: 300 atctttactttttgaacactagcttccatgagggtttagttggccaatatcccagctgta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atctttactttttgaacactagcttccatgagggtttagttggccaatatcccagctgta 559
Query: 360 gagaaaatactaaaatgaatttattttttcatgtcctccatgtgactaaatggatgagat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gagaaaatactaaaatgaatttattttttcatgtcctccatgtgactaaatggatgagat 619
Query: 420 ggggttctagcactaagagtgttttaatctttctccttactgttcttctaaatttacttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggggttctagcactaagagtgttttaatctttctccttactgttcttctaaatttacttt 679
Query: 480 catggatatgtcccatgatctgttatttttgcaatgtctaataatcttccttgtgtcaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catggatatgtcccatgatctgttatttttgcaatgtctaataatcttccttgtgtcaaa 739
Query: 540 tttattttaaacaacttatcaattccaatcttttaaaccaaaatctatcctatacattgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttattttaaacaacttatcaattccaatcttttaaaccaaaatctatcctatacattgt 799
Query: 600 atagtacaaaaccttactgtttcccactcaatttttttatttgtatttaaacgt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atagtacaaaaccttactgtttcccactcaatttttttatttgtatttaaacgt 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
