TCTCAGACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCATTCCATATACTCAGGAAAAATAGGCAAAATAAAACAA
AACTTAAAAAAAAATACTGTGCATCCAGCATTGACTAATGACTGACTAAT
TCCTCCCAAAGAGGTATCAGTCTTGAACAGAAAATTTTAGTAACTTTTGT
AGACCCCAGGCTTATATATTCTACATAGGCTGTCATATCTGTTTTCAGGC
CCTTTTGCCAAGTTATACTTTTTAAAATGTAAACAGAGACAGGGGCCTGC
AAGTCTGGCCATTTTTTGTATGGGAGATTTACATAAATATTGTCAAAATT
ATTTTTAAGTCCCAGGAACACCACAAAGACTAAACAATGAGAACCCGGAT
CCCCTCTGGAATATGACGGCCCAGTCTTTTCAGTTCACCAAAAACCCTCC
AGAGCTGAGTTGACTAAATCATGCTGGTTGTGCTATGAGATAAGACTGCC
ATACTCTTAGGGCATAGCTGATTTAAAACTTTACCCAAACTGAGAACTTC
AATTAGCCCCAATGAGTATAGATGACAACAAGGTAAAGCTAGGTTGACCT
TACAAGCCATAGAGGGTCAAGACTCCTATATAGAGACAGTTCCTGGGGCC
TATAGCCATCTTTGTAACTGGACTTACAAGATAAATACAAACAATGGTAT
CTACCTATTGCCACCCATCAATGCCTGGTGGGTATGCACTAC

ATGTTGGCGATGACAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGC
CCCATCTTTTAAGGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGT
TCTTTATATATATTGGATATTAGTGGCCTATCTGATTTAAGATAGGTAAA
GATCCTTTCCCAATCTGTTGGTAGTCTTTTTGTCTTATTGACGGTGCCTT
TTGCCTTGAAGAAGCTTTGCAGTTTCATGAGGTCCCATTGTCAAACCTCG
ATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTTCCCTGTG
CCCATTTCTTCGAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGT
CTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTAC
AAGGAGAAAGGAATGGATCGATTTGCATTCTTCTGCATGATAACAACCAG
TTTTGCCATCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGT
TTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTT
CTGGGTCTTCAATTCTATTCCATTGTTATACTTGTCTGTCACTATACCAG
TACCATGCAGTTTTTATAACAATTGCTCTGTAGTAAAGCTTTAGGTCACG
CATGGTGATTCCACCAGAGGTACTTTTATCCTTGAGAAA

Query= MSMg01no544_h14.b1 MSMg01no544_h14.b1 CHROMAT_FILE:
MSMg01no544_h14.b1 PHD_FILE: MSMg01no544_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:09 2005
         (690 letters)



>mm_chrX_134566239_134567328
          Length = 1090

 Score = 1272 bits (658), Expect = 0.0
 Identities = 679/686 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattccatatactcaggaaaaataggcaaaataaaacaaaacttaaaaaaaaata 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattccacatactcaggaaaaataggcaaaataaaacaaaacttaaaaaaaaata 264

                                                                       
Query: 65  ctgtgcatccagcattgactaatgactgactaattcctcccaaagaggtatcagtcttga 124
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgcatccagcattggctaatgactgactaattcctcccaaagaggtatcagtcttga 324

                                                                       
Query: 125 acagaaaattttagtaacttttgtagaccccaggcttatatattctacataggctgtcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagaaaattttagtaacttttgtagaccccaggcttatatattctacataggctgtcat 384

                                                                       
Query: 185 atctgttttcaggcccttttgccaagttatactttttaaaatgtaaacagagacaggggc 244
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctgttttcaggcccttttgccaagttatactttttaaaatgtaaacagagacaggggc 444

                                                                       
Query: 245 ctgcaagtctggccattttttgtatgggagatttacataaatattgtcaaaattattttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcaagtctggccattttttgtatgggagatttacataaatattgtcaaaattattttt 504

                                                                       
Query: 305 aagtcccaggaacaccacaaagactaaacaatgagaacccggatcccctctggaatatga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtcccaggaacaccacaaagactaaacaatgagaacccggatcccctctggaatatga 564

                                                                       
Query: 365 cggcccagtcttttcagttcaccaaaaaccctccagagctgagttgactaaatcatgctg 424
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 565 cggcccagtcttttcagttcaccaaaaaacatccagagctgagttgactaaatcatgctg 624

                                                                       
Query: 425 gttgtgctatgagataagactgccatactcttagggcatagctgatttaaaactttaccc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttgtgctatgagataagactgccatactcttagggcatagctgatttaaaactttaccc 684

                                                                       
Query: 485 aaactgagaacttcaattagccccaatgagtatagatgacaacaaggtaaagctaggttg 544
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaactgggaacttcaattagccccaatgagtatagatgacaacaaggtaaagctaggttg 744

                                                                       
Query: 545 accttacaagccatagagggtcaagactcctatatagagacagttcctggggcctatagc 604
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 accttacaggccatagagggtcaagactcctatatagagacagttcctggggcctatagc 804

                                                                       
Query: 605 catctttgtaactggacttacaagataaatacaaacaatggtatctacctattgccaccc 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 catctttgtaactggacttacaagataaatacaaacaatggtatctacctattgccaccc 864

                                     
Query: 665 atcaatgcctggtgggtatgcactac 690
           ||||||||||||||||||||||||||
Sbjct: 865 atcaatgcctggtgggtatgcactac 890


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)