XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGGCAAGA
GCTCAAGCAAGAGCAGAGTCATGAAGCATAGAGGAAAGGTGCTTCCTGTC
TTGCTGTCAAGCTCATATCCAGCATCATTTCTCATATAGACAGTACCACC
TGCCTGAGAATTCTGCTACCTACAGTCAACTGAGCATTTCAACATAAATT
AGCTATTAATGAACAGACATGCCCCTAGGCCAATCTGAAGGAAATAATTA
CTCATAACCTTCTTCCCAGGTTATGTCAACTTGACAACCAAGACTAGCCA
ATCAGACACCTAAGCAAATCACCAAGGTTTAAATGTATCTACCTTCTCAT
CCTCTTAAAGAGAAAGATAGTTTTGTGGTGTGTGTGTGCATGTGTGTGTG
TGTGTGTGTGTCTGTGTAGCCATGTGTTGTTCTATAGAAAATTTTTCAGA
TGAGTGGGTGAGGCAATGAAATTAGACATATGAACATCACCAATCAGTGT
TTATTTTAGTCTCTTCATGTTTCCAGGTAGTTAAATTCAAGCTCCTCTTT
CAAGAGTCTAAAGTCCTGTCCTACTTGAAAAGATGCTATGTACTATAAAC
AAGCGTATTAACCAGAGCTCATTAACTGACTCTTCATAGGAAAGTTTCCT
TTGCTATGTCATCCATGAATTTTCATTTTGTCCTCTCCCAGGTTAGCCTG
AATTAGTAACAGTATGCACACTGGAAATGACAGAAGATTCTTCCACAGGA
CTTAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTTAGTTGCTTGTAGTTCTCTGTGTAGGGTTGAGGC
CACATGGCCAGAAACAAGCAGTCTTATCCTGTTCTTTTCTGATTCTGTTC
ATTTGGGTAATATCTTTATTTCTTTTGCCTAGATGGGTTAAGGGTCTATC
AATCTTGTTTACCTTCTCAAAGAATCAGTTCTCAGATTCATTGATTCTTT
GTATTTTTTTCTTTGTTCTATTTCATTGATTCATGTTCTGAGTTTTATTA
TTTATTGCTATTGACTGGATTTGCACTTTGTCCTTGTTTTTCCAGCTTTT
TGAGTTGCATCATTAAGCCATTTACTTGTGTTCTTTCTAATTTTAATGTA
GTCCCTTAGAGATATAAATTTCCTTGATAGGACTGCTTTCAATGTGTCCT
ACAGATTTTATTGATTTTTCATTTTCTTTTAGTTCCAGTAAATTTTTCTT
TCTTTCTTGATTTCTTCTTTGACCTCTTTATCCTTCAGTAATGAGCTCTT
TAATCTTCATGACTTTGTGTTTTTACTAGAGGTGTTTTTTTCTGTCAATT
TTAAGGTTTTTTTTTCTTCATTGCTGTCATATAGGATACAAGGGGTTACT
TCAATCTATTTGAATTTGTGAAGATTTGTTTTGTGTCCTGGGATGTGGTC
TACATTAGAAAAACCTCTATTATTGCTGAGTAGA

Query= MSMg01no546_e22.b1 MSMg01no546_e22.b1 CHROMAT_FILE:
MSMg01no546_e22.b1 PHD_FILE: MSMg01no546_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:33 2005
         (699 letters)



>mm_chrX_74362217_74363315
          Length = 1099

 Score = 1286 bits (665), Expect = 0.0
 Identities = 689/701 (98%), Gaps = 8/701 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaggcaagagctcaagcaagagcagagtcatgaagcatagaggaaaggtgcttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcaaggcaagagctcaagcaagagcagagtcatgaagcatagaggaaaggtgcttc 260

                                                                       
Query: 65  ctgtcttgctgtcaagctcatatccagcatcatttctcatatagacagtaccacctgcct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtcttgctgtcaagctcatatccagcatcatttctcatatagacagtaccacctgcct 320

                                                                       
Query: 125 gagaattctgctacctacagtcaactgagcatttcaacataaattagctattaatgaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaattctgctacctacagtcaactgagcatttcaacataaattagctattaatgaaca 380

                                                                       
Query: 185 gacatgcccctaggccaatctgaaggaaataattactcataaccttcttcccaggttatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacatgcccctaggccaatctgaaggaaataattactcataaccttcttcccaggttatg 440

                                                                       
Query: 245 tcaacttgacaaccaagactagccaatcagacacctaagcaaatcaccaaggtttaaatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 tcaacttgacaaccaagactagccaatcagacacctaagcaaatcaccaaggtataaatg 500

                                                                       
Query: 305 tatctaccttctcatcctcttaaagagaaagatagttttgtggtgtgtgtgtgcatgtgt 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 501 tatctaccttctcatcctcttaaagagaaagatagttttgtggtgtgtgtgtg--tgtgt 558

                                                                       
Query: 365 gtgtgtgtgtgtgtgtctgtgt------agccatgtgttgttctatagaaaatttttcag 418
           |||||||||||||||| |||||      ||||||||||||||||||||||||||||||||
Sbjct: 559 gtgtgtgtgtgtgtgtgtgtgtgtgtgtagccatgtgttgttctatagaaaatttttcag 618

                                                                       
Query: 419 atgagtgggtgaggcaatgaaattagacatatgaacatcaccaatcagtgtttattttag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgagtgggtgaggcaatgaaattagacatatgaacatcaccaatcagtgtttattttag 678

                                                                       
Query: 479 tctcttcatgtttccaggtagttaaattcaagctcctctttcaagagtctaaagtcctgt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tctcttcatgtttccaggtagttaaattcaagctcctctttcaagagtctaaagtcctgt 738

                                                                       
Query: 539 cctacttgaaaagatgctatgtactataaacaagcgtattaaccagagctcattaactga 598
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 739 cctacttgaaaagatgctatgtactataaacaagcatattaaccagagctcattaactga 798

                                                                       
Query: 599 ctcttcataggaaagtttcctttgctatgtcatccatgaattttcattttgtcctctccc 658
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctcttcataggaacgtttcctttgctatgtcatccatgaattttcattttgtcctctccc 858

                                                    
Query: 659 aggttagcctgaattagtaacagtatgcacactggaaatga 699
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 aggttagcctgaattagtaacagtatgcacactggaaatga 899


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space:   750321
Effective search space used:   750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)