TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCACCTGTATACTGCCAAATGGCTGAGAAGCACCTGAAAAAATGTTCAG
CACCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCAC
CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATG
CTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT
GCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAA
TTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATA
TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATAAAGTA
CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAACTGGA
TGGACCTGGAGGGCATTATCCTGAGTGAGGTAACCCAATCACAAAAGAAC
TCACATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGA
ATACCCAAGATACAAGATACAAGTTGCCAAAACACATGAAACTCAAGAAG
AACAAAGACCAAAGTGTGGACACTTTA

TACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTTTGTAAACCAGGTTGGCCTCTCACA
GAGAACAGCCTGTCTCAGCCTCCTGAGTGATGGGATTTAAGGTATGTGCC
ACCACACCAGGCTTGAAAAGTATCTTAACTGAAAGGTAAAAAGGGACTTG
TCCACATCTTGGCGAGTATGGTTAAAGGGCCTTTACTCATGGACCCCCGT
TTTGTGGGAACCAGGGAAGAGTTGGAGCCTATGCAAATAAAAAAGCAGCT
TTCTAGGAATCAAAACACCGTAAAGATGGCTCTCTCTCTCTCTCTTTTTT
GTTCTTTCTGCTATTTTCATTTCCCTCTGCAATTATGTATCATCTCCATC
AATAATCTCATCAATATCTGCAGTCCTTAACCTGTGGGTCTTGACCCCTT
TGTGGGATCAAACAGCCATTTCACAGAGGTTGCCTAAGACCATCAAAAAA
CGCAGATATTTACATTACAATTCAGTAGCAAAATTACAGCTATGAAGTAG
TAACAAAAATAAGTCTATGGTTGAGGGTCACCACAATATGAGGAACTGCA
TTAAAGAGTTGCAGCTTTTGGAAGGTTGAGAACTGCCTTCTTTAGTTTAG
AGTATAAACTGAGAGCTGTTCCAGAATTTATAAACAAACAGAAGAGCCTT
CAAGTCTAAGCCTGGGATGGGTTATGACN

Query= MSMg01no546_h03.g1 MSMg01no546_h03.g1 CHROMAT_FILE:
MSMg01no546_h03.g1 PHD_FILE: MSMg01no546_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:45 2005
         (598 letters)



>mm_chrX_98526010_98527007
          Length = 998

 Score = 1094 bits (566), Expect = 0.0
 Identities = 590/598 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttgtaaaccaggttggcctctcacagagaacagcctgtctcagcctcctgagtgatg 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 638 actttgtaaaccaggttggcctctcacagagagcagcctgtctcagcctcctgagtgatg 579

                                                                       
Query: 61  ggatttaaggtatgtgccaccacaccaggcttgaaaagtatcttaactgaaaggtaaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 578 ggatttaaggtatgtgccaccacaccaggcttgaaaagtatcttaactgaaagataaaaa 519

                                                                       
Query: 121 gggacttgtccacatcttggcgagtatggttaaagggcctttactcatggacccccgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gggacttgtccacatcttggcgagtatggttaaagggcctttactcatggacccccgttt 459

                                                                       
Query: 181 tgtgggaaccagggaagagttggagcctatgcaaataaaaaagcagctttctaggaatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tgtgggaaccagggaagagttggagcctatgcaaataaaaaagcagctttctaggaatca 399

                                                                       
Query: 241 aaacaccgtaaagatggctctctctctctctcttttttgttctttctgctattttcattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaacaccgtaaagatggctctctctctctctcttttttgttctttctgctattttcattt 339

                                                                       
Query: 301 ccctctgcaattatgtatcatctccatcaataatctcatcaatatctgcagtccttaacc 360
           ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccctctgcaattatgtaccctctccatcaataatctcatcaatatctgcagtccttaacc 279

                                                                       
Query: 361 tgtgggtcttgacccctttgtgggatcaaacagccatttcacagaggttgcctaagacca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgtgggtcttgacccctttgtgggatcaaacagccatttcacagaggttgcctaagacca 219

                                                                       
Query: 421 tcaaaaaacgcagatatttacattacaattcagtagcaaaattacagctatgaagtagta 480
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 218 tcagaaaacgcagatatttacattacaattcagtagcaaaattacagctatgaaatagta 159

                                                                       
Query: 481 acaaaaataagtctatggttgagggtcaccacaatatgaggaactgcattaaagagttgc 540
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 158 acaaaaataagtctgtggttgagggtcaccataatatgaggaactgcattaaagagttgc 99

                                                                     
Query: 541 agcttttggaaggttgagaactgccttctttagtttagagtataaactgagagctgtt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  agcttttggaaggttgagaactgccttctttagtttagagtataaactgagagctgtt 41


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)