Query= MSMg01no548_f01.b1 MSMg01no548_f01.b1 CHROMAT_FILE:
MSMg01no548_f01.b1 PHD_FILE: MSMg01no548_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:12 2005
(571 letters)
>mm_chrX_136927919_136928889
Length = 971
Score = 1075 bits (556), Expect = 0.0
Identities = 565/568 (99%)
Strand = Plus / Minus
Query: 4 ggaattctgtggaataaccagaattactggggttgcttgtttctgaaaactgatgggctc 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ggaattctgtggaagaaccagaattactggggttgcttgtttctgaaaactgatgggctc 712
Query: 64 tgggtagacaagtagatagatagtattttgaccatcaaattcaagtcaccagaccagcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgggtagacaagtagatagatagtattttgaccatcaaattcaagtcaccagaccagcca 652
Query: 124 acttgaccttcagaaaggaaaaggctttcagagcaagctaaaggtcaaacttacatagta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acttgaccttcagaaaggaaaaggctttcagagcaagctaaaggtcaaacttacatagta 592
Query: 184 acttcattgtgatggcagaacaccctgcctgtttgcttgtccatctatctttgtgttccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 acttcattgtgatggcagaacaccctgcctgtttgcttgtccatctatctttgtgttccc 532
Query: 244 aaggcagaccctacctggatgtataagtactcgaaagcagcaggatcccgacgcagcagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 531 aaggcagaccctacctggatgtataagtactcgaaagcagcaggatcccgacgtagcagc 472
Query: 304 tccactgggtccttgggaaagaagcttattcggaagaggcatttcattccatggtagtgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tccactgggtccttgggaaagaagcttattcggaagaggcatttcattccatggtagtgt 412
Query: 364 gtccgctgcacaacctgagacccggtggggagagaatgggaaaaacccatagagtcaatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtccgctgcacaacctgagacccggtggggagagaatgggaaaaacccatagagtcaatg 352
Query: 424 accgggtgggggtggcaggcagctaggcagctgcttaaagtagggtttatggatgagcta 483
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 acggggtgggggtggcaggcagctaggcagctgcttaaagtagggtttatggatgagcta 292
Query: 484 ggttgttgtttcctactcttgtctcaaacatggcaaattcatatcaagcattctctcatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ggttgttgtttcctactcttgtctcaaacatggcaaattcatatcaagcattctctcatc 232
Query: 544 ctgggctttattttccctagtttgagtt 571
||||||||||||||||||||||||||||
Sbjct: 231 ctgggctttattttccctagtttgagtt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_f01.g1 MSMg01no548_f01.g1 CHROMAT_FILE:
MSMg01no548_f01.g1 PHD_FILE: MSMg01no548_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:12 2005
(597 letters)
>mm_chrX_136832944_136833940
Length = 997
Score = 1133 bits (586), Expect = 0.0
Identities = 595/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 1 ctgttatctcacagtaactgcaattgctcctgctgagaacgtgagcgctcccctagtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttatctcacagtaactgcaattgctcctgctgagaacgtgagcgctcccctagtgta 260
Query: 61 agatgcctgtgctcctgagcccaaagcctagctctgcccactactagctctggacttgga 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatgtctgtgctcctgagcccaaagcctagctctgcccactactagctctggacttgga 320
Query: 121 caaattatttaagtgctctatgctgccttttcctcacaagttaatgattgtgaagtactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaattatttaagtgctctatgctgccttttcctcacaagttaatgattgtgaagtactt 380
Query: 181 agataattacttagcactccaaaaaaccttttgttatcattatccaacgaagagactgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agataattacttagcactccaaaaaaccttttgttatcattatccaacgaagagactgat 440
Query: 241 tattgttgtattcagattatttgggacaaggtctgatcatgtagggggggaagaagctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattgttgtattcagattatttgggacaaggtctgatcatgtagggggggaagaagctac 500
Query: 301 actatgtatataaagtaatatgtgacctctggccaataaccgttttttttt-ctttttaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 actatgtatataaagtaatatgtgacctctggccaataaccgttttttttttctttttaa 560
Query: 360 gagatttattatgtagacagtgttctgcctgaatatgtgcttgcaggacagaagagggca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagatttattatgtagacagtgttctgcctgaatatgtgcttgcaggacagaagagggca 620
Query: 420 ccagatcacattatagatggttgtgagccaccatgtggttgcgtgaattgagctcaggac 479
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 ccagatcacattatagatggttgtgagccaccatgtggttgtgtgaattgagctcaggac 680
Query: 480 ctttggaagagcagccagtgagtgctcttaacctccgagccatctctctagcccccaccc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttggaagagcagccagtgagtgctcttaacctccgagccatctctctagcccccaccc 740
Query: 540 ccaataatcttttcaattagcctcctatcagcaccccaaccccccactactcattagt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaataatcttttcaattagcctcctatcagcaccccaaccccccactactcattagt 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
