Query= MSMg01no548_f16.b1 MSMg01no548_f16.b1 CHROMAT_FILE:
MSMg01no548_f16.b1 PHD_FILE: MSMg01no548_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:15 2005
(541 letters)
>mm_chrX_165356553_165357495
Length = 943
Score = 1023 bits (529), Expect = 0.0
Identities = 536/539 (99%), Gaps = 2/539 (0%)
Strand = Plus / Plus
Query: 5 gaattcccctgagggtctcctgtct--gtttattgttctccaaaagttgttagtgtctaa 62
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccctgagggtctcctgtctatgtttattgttctccaaaagttgttagtgtctaa 264
Query: 63 aagaaatcatccttatgtaatccccccaactctgtttctcagatcattgctccagctctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagaaatcatccttatgtaatccccccaactctgtttctcagatcattgctccagctctc 324
Query: 123 atttgaaatttccagttgtgaaagtcattcttttgtttattcccaccagcgaaattcctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgaaatttccagttgtgaaagtcattcttttgtttattcccaccagcgaaattcctt 384
Query: 183 ttctaacctggagatgctcttcctcccctgtatccttatttgtctctgtgttgattgact 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctaacctggagatgctcttcctcccctgtatccttatttgtctctgtgttgattgact 444
Query: 243 tctgtgttgaagctgctggctaagaagattaatgtgtgacaggggatctgtagctttacc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgtgttgaagctgctggctaagaagattaatgtgtgacaggggatctgtagctttacc 504
Query: 303 ttgtgtaacttatcaagcctggaggggtttctcacttcacatctcagttcccagactcat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgtgtaacttatcaagcctggaggggtttctcacttcacatctcagttcccagactcat 564
Query: 363 gtgtggatagctctggggctaatcatatttgataatcccattctcctgtgagaggctgtg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgtggatagctctggggctaatcatatttgataatcccattctcctgtgagaggctgtg 624
Query: 423 aacaagaaatgagtcagcactcaggtgatttcctgtaaacctgctttccaccttaatttg 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacaagaaatgagtcagcactcaggtgatttcctgtaaacctgctttccaccttaatttg 684
Query: 483 acctgctttccaccttaatttataaaataaaggagagctgatggttgggcaaataaaag 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acctgctttccaccttaatttataaaataaaggagagctgatggttgggcaaataaaag 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 943
Length adjustment: 10
Effective length of query: 531
Effective length of database: 933
Effective search space: 495423
Effective search space used: 495423
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_f16.g1 MSMg01no548_f16.g1 CHROMAT_FILE:
MSMg01no548_f16.g1 PHD_FILE: MSMg01no548_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:15 2005
(146 letters)
>mm_chrX_165526919_165527464
Length = 546
Score = 282 bits (146), Expect = 5e-81
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 1 tatgaactcacaccagctataaaaatatgtgccatgagatttcacaaataaaatccttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tatgaactcacaccagctataaaaatatgtgccatgagatttcacaaataaaatccttta 287
Query: 61 gcaacaaatggcaatatttatatcttcaagccctttaaaagttgggtcaaaaatgtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcaacaaatggcaatatttatatcttcaagccctttaaaagttgggtcaaaaatgtctcc 227
Query: 121 atttaattcagttgcctgctatttag 146
||||||||||||||||||||||||||
Sbjct: 226 atttaattcagttgcctgctatttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
