BAC Information

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BAC

Clone NameB6Ng01-010G20
ChromosomeY (Build37)
Map Location 1,870,346 - 1,870,571
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G20.bB6Ng01-010G20.g
ACCDH846098DH846099
length1,237279
definitionDH846098|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G20, 5' end.DH846099|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaagactttccacagagagataatgccaatactcttcaaatt
attgcacagaattgaaacagaaagaacattgccaaattaattctatgagt
ccacaaccatcctaatacctaaaccatacaaagaataaacaaaaaagaaa
atttcagagcaatttcccttatgaatattgaatccaagagcacatgaaag
acatcttacctaaaccatacaaagacttaacaaaaaagacaatttcagat
caatttcgcttatgaacattgaatctaagaacacatgaaagacatcatac
atcatgatcaagtaagtttcatcctagggaggcaggaattgttcaatata
caaaaatctatcagcagaatctaccattagaaacaaacagaaagaaaaac
atccccatgattatcttactagacactgaaaaagcttttgaaaaaaaaaa
tcaaacaccccttcatgataaaagtcttggagagagcaaggatacaagat
gcatagataaacagagcaaaggtgatatataccaagccaatagccaacac
caaattaaatggagagaaaattaaaacatctacactaaaattgggacaag
acaaggctgcccactcttcttatatatcacttgaagttctatttaaagca
aaaagacaactaaaggagtcaagaagatacaaaatgaaaaggaagaagta
aaagtattgctattcaaagatatcatagtaaatacatcagtgatcccaag
aattctacaagaaaaaaaaactatgttcttaatatttatttatttattta
tttatttatttatttcatgtatgttagtatactatcacggtcttcagaca
caccagaaagaggatatcggatccctattacagatggatgtgagccacca
tgttgttgctgaaattgaactcaggactctggaagagcagtcagtgctct
tcaccactgaatcatctctcagccctaccagaaactcttacagctgacaa
ataccttcagcaagagctggatacaaattaactcaagaaatagtaggcct
cctctaacagcataatggctagaaagaagatagtgaacagtaccatcata
tagcaaaaacataaaatattccggtacttacagcagtaaagactgtatga
cagatccagtctgaaagaattgagagaattcgaatggagatctcctgtct
tttgattgggaatacattggactggtcactttccagc
attcaggctcacagtcagctattggatggatcacagggtccccaatggag
gggctagagaaagtatccaaggagctaaagggatctgcaaccctataggt
ggaacaacaatatgaactaaccagtaccccggagctcttgactctagctg
catatgtatcaaaagatggcctagtcggccatcactagaaagagaggccc
attggactcgcaaactttatatgccccagtacaggggaacgccagggcca
aaaagtgggagtggatgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870346_1870571
seq2: B6Ng01-010G20.g_126_351

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTATCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||| ||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACAATATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTAGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AGGGGCAGTGGGTGGGTAGGGGAGTG  226
      || || ||||| ||||||||||||||
seq2  AGTGGGAGTGGATGGGTAGGGGAGTG  226