BAC Information

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BAC

Clone NameB6Ng01-012K07
ChromosomeY (Build37)
Map Location 1,870,359 - 1,870,517
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012K07.bB6Ng01-012K07.g
ACCDH847681DH847682
length485486
definitionDH847681|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K07, 5' end.DH847682|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttgttcagctctgagccccatttttaatggggttacttaattttctgga
gtccaccttcttgagttctttatatatattggatattagtcccctatctg
atttaggatggaccatctagagactgccatatccagggatccatcccata
atcagcttccaaacactgacaccattgcatacactaacaatattttcctg
aagggacccagatatagctgtctcttgtgagactatgctggggcctagca
aacaccgaagtggatgctcacagtcagctatcggatggatcacagggccc
ccgatggaggagctagagaaagtatccaaggagctaaagggatctgcaac
cctataggtggaacaacattatgaactaaccagtacccctgagctcttga
ctctagctgcatatgtatcaaaaagatgtcctagtcggccatccctggaa
agagaagcccattgtacttgcaaactttatatgcc
acctccaggcctaacagttcttggtctacatttttccctctagcttccca
cctaaccaaggttcctttctctggcacccccttccctctctcggacctgg
aaggcctgcttcctcctttttacccagcaattggcttgtcatccttatta
tccaattaattaattaattaattaggggaaaattcctctacactactcag
ctatttagaatgaagacatcatgagttttactggcaaatgtatggaaact
agaaaatatcatcatccatagtctcagacccaaaagtatatgtatggtac
gtacttactaataagtggatattaaacaaaaaatacagaatacccaggat
acaatccacagaattcaagaatatttaactagcagaagggcccaagtgag
aatgctccaatcccacttgagagggagtagaaagcagtcagagtaggcag
agggagggaggggcctgggtaggagtggggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870359_1870517
seq2: B6Ng01-012K07.b_375_534

seq1  CCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  50

seq1  CTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCATAGGTATC-AAAAG  99
      ||||||| ||||||||||||||||||||| |||||||| ||||| |||||
seq2  CTAACCAGTACCCCTGAGCTCTTGACTCTAGCTGCATATGTATCAAAAAG  100

seq1  ATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAAC  149
      ||| |||||||||||||| ||||||||||| |||||||| || |||||||
seq2  ATGTCCTAGTCGGCCATCCCTGGAAAGAGAAGCCCATTGTACTTGCAAAC  150

seq1  TTTATATGCC  159
      ||||||||||
seq2  TTTATATGCC  160