BAC Information

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BAC

Clone NameB6Ng01-012N17
ChromosomeY (Build37)
Map Location 1,870,361 - 1,870,422
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210
Downstream geneUbe1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012N17.bB6Ng01-012N17.g
ACCDH847826DH847827
length4921,185
definitionDH847826|Mus musculus domesticus DNA, BAC clone: B6Ng01-012N17, 5' end.DH847827|Mus musculus domesticus DNA, BAC clone: B6Ng01-012N17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctgcatagtgtctttggcaataggggcccacttataaaccc
cgagaagtaaccaaggggcagcataagtgtagctaccataattcatcata
gtgacttcaaagaaactgaagttagacacaatgccgagatgagtgggtga
ggaggagcccagcccctaacagatacatctgtagatcctgcatctatagt
tcaggaaataacacaaaaagtagaagaaaatgatttcaagagacatgtta
ccaggaactctgccatgttacagtctctctcagaaatggctgcataaaca
agacctgaatactggacatgttaacatggaagggagagaattttgcaggg
taatacacctcataaagaactaccagcaataatgtctgctaggagaagga
gaattagcatctcctaagaataagttccctaaggagctaaagaggtctgc
aaccctataggaggaacaacaatatgaactaaccagtacccc
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaacccagagat
ttcacctaacaccaatcagaatggctaagatcaaaaattcaggtaacaga
agatgctggtgaggatgtggggaaagaggagcagtcccctgttgttggtg
ggattgcaagcttgtactaccactctggaaattagtctggtgtttcctag
gacaattggacatagtactaccagatgatcccgcaatacctctcctggac
atatattcagaagatgtttcaaccggtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccttcaacagaggaatggatacagaaaatatggtacatttacacaatg
gaatactactcaactattaacaagaatgaatttttgaaattcctaggcaa
atggatggacctagagggcatcattctgactgaggtaacacaatcacaaa
ggaactcacatgatatgtactcattgataagtggatgttagcccagaaac
ttagaatacccaagatataagatacaatatgtaaaacacatgaaactcat
gaagatcgaagaccaaagtgtggaccctttgccccttagaattgggaaca
aaacacccagggaaggagttacagagacacagtttggagatgagatgaaa
ggatggaccatctagagattgccatatctggggatccatcccaacattag
cctccaaatgctgacaccattgcatatactagcaagattttgctgaaagg
accctgatatagctgtctcttgtgaggctaattttgggcctagcaacaca
gaagtgggatgctcagagtcagctattgtatggaacaccagggtctccaa
tgcagatctaagagaaagtaccaggagctaaaggggtctgcagctcttat
aggtggacacaatatggactaaccagtacacccctccatcccgcagcttg
gtgtctcctagctgcataggatcagaagatggctcagcggccatcagggc
agagaagccattgatcttgcaactttattgcctagttaacgggggatgtc
cgagggccagatgttgggagttggtgctggatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1870361_1870422
seq2: B6Ng01-012N17.b_475_536

seq1  AAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACT  50
      |||||||||||| | |||||||||||||||| ||||||||| ||||||||
seq2  AAGGAGCTAAAGAGGTCTGCAACCCTATAGGAGGAACAACAATATGAACT  50

seq1  AACCATTACCCC  62
      ||||| ||||||
seq2  AACCAGTACCCC  62