BAC Information

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BAC

Clone NameB6Ng01-013G20
ChromosomeY (Build37)12 (Build37)
Map Location 573,321 - 573,39269,730,744 - 69,731,598
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013G20.bB6Ng01-013G20.g
ACCDH848243DH848244
length495859
definitionDH848243|Mus musculus domesticus DNA, BAC clone: B6Ng01-013G20, 5' end.DH848244|Mus musculus domesticus DNA, BAC clone: B6Ng01-013G20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,392)(69,730,744 - 69,731,598)
sequence
gaattctattgaatatttttgcatcgatattcataagggaaattgatcta
aacttctctatctttgttgggtctttctgtggtttaggtatcagagtaat
ttgggaaacacatgaaactcaagaagaatgaagaccaaagtgtggacagt
ttgccccttcttagaattgggaacaaaacacccatggaaggagttacaga
gacaaagtttcgagctgagacaaaaggatggagcatctagagactgccat
atccagggatccatcccataatcagcctctaaacgctgacaccattgcat
acactagtaagattttgctgaaaggaccctgatatagctgtctcttgtga
gactatggcggggcctagcaaacacagaagtggatgctcacagtgagcta
ttggatggattacagggcccgcaatggaggagctagagaaagtacccaag
gagctaaagggatatgcaaccctataggtggaacaacaatatgaa
gaattcaatggaaacagactgacattaaggatgttagtaactaaacagat
agcattctctactacaggtcttttctgctcaaaagagattcttgtggttt
ctcatgctttcttaaccaaattaagtgaaatgcccatgctgttcttctag
ggggtaaggatatacaaaatttccaaacatagatgaatagtaatatggac
caccaaagtgctcatggactctttccttggtcctcatttttttgtgatga
aatatacaaactctgggacacaagaattaaaagcacttagtgaattccag
atctctccccatgtatggtctcatgatttgccaggcatattatcatttat
catactgtcattgagaaaagaatcttctcgtaaggtgataacaggcagaa
gacaatggccttccattgattccacaagaaagagctgccctaaacagaac
agtagatggcctcctaaatgtagaccacagacatcactttttcatgttga
gtgactgtaattaaagacacaatgactatgaacaactatctccccaaagg
ttagaatatatatatatatgtatatatctttattctatctttaagataga
actgtccaaataaggcatccctcacagtcacctactttatagcaagtgtc
ctcagtgctcctgcaactttcatctttgtcatgttgctgggtaaatggtt
cccaaaacaagaaacgggaaataaaaaaactaaacagaggttttaagcat
tttgtcactttggctcctcaagtcagagagagaacaaaggattctctgta
caagcaaatatgattgatctctatatgacaaacatcacctcgtgctctgg
tgggcacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573392
seq2: B6Ng01-013G20.b_470_541

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATATGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA  72
      |||| |||||||||||||||||
seq2  ATAGGTGGAACAACAATATGAA  72

seq1: chr12_69730744_69731598
seq2: B6Ng01-013G20.g_67_925

seq1  GAATTCAATGGAAACAGACTGACATTAAGGATGTTAGTAACTAAACAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGAAACAGACTGACATTAAGGATGTTAGTAACTAAACAGAT  50

seq1  AGCATTCTCTACTACAGGTCTTTTCTGCTCAAAAGAGATTCTTGTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTCTACTACAGGTCTTTTCTGCTCAAAAGAGATTCTTGTGGTTT  100

seq1  CTCATGCTTTCTTAACCAAATTAAGTGAAATGCCCATGCTGTTCTTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTTTCTTAACCAAATTAAGTGAAATGCCCATGCTGTTCTTCTAG  150

seq1  GGGGTAAGGATATACAAAATTTCCAAACATAGATGAATAGTAATATGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAGGATATACAAAATTTCCAAACATAGATGAATAGTAATATGGAC  200

seq1  CACCAAAGTGCTCATGGACTCTTTCCTTGGTCCTCATTTTTTTGTGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGTGCTCATGGACTCTTTCCTTGGTCCTCATTTTTTTGTGATGA  250

seq1  AATATACAAACTCTGGGACACAAGAATTAAAAGCACTTAGTGAATTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAAACTCTGGGACACAAGAATTAAAAGCACTTAGTGAATTCCAG  300

seq1  ATCTCTCCCCATGTATGGTCTCATGATTTGCCAGGCATATTATCATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCCCATGTATGGTCTCATGATTTGCCAGGCATATTATCATTTAT  350

seq1  CATACTGTCATTGAGAAAAGAATCTTCTCGTAAGGTGATAACAGGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTCATTGAGAAAAGAATCTTCTCGTAAGGTGATAACAGGCAGAA  400

seq1  GACAATGGCCTTCCATTGATTCCACAAGAAAGAGCTGCCCTAAACAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGGCCTTCCATTGATTCCACAAGAAAGAGCTGCCCTAAACAGAAC  450

seq1  AGTAGATGGCCTCCTAAATGTAGACCACAGACATCACTTTTTCATGTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGGCCTCCTAAATGTAGACCACAGACATCACTTTTTCATGTTGA  500

seq1  GTGACTGTAATTAAAGACACAATGACTATGAACAACTATCTCCCCAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTAATTAAAGACACAATGACTATGAACAACTATCTCCCCAAAGG  550

seq1  TTAGAATATATATATATATGTATATATCTTTATTCTATCTTTAAGATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATATATATATATGTATATATCTTTATTCTATCTTTAAGATAGA  600

seq1  ACTGTCCAAATAAGGCATCCCTCACAGTCACCTAC-TTATAGCAAGTGTC  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTGTCCAAATAAGGCATCCCTCACAGTCACCTACTTTATAGCAAGTGTC  650

seq1  CTCAGTGCTCCTGCAACTTTCATCTTTGTCATGTTGCTGG--TAATGGTT  697
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  CTCAGTGCTCCTGCAACTTTCATCTTTGTCATGTTGCTGGGTAAATGGTT  700

seq1  CCCAAAACAAGAAACGGGAAATAAAAAAACTAAACAGAGGTTTTAAGCAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACAAGAAACGGGAAATAAAAAAACTAAACAGAGGTTTTAAGCAT  750

seq1  TTTGTCACTTTGGCTCCTCAAGTCAGAGAGGAGAACAAAGGAGTCTCTGT  797
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  TTTGTCACTTTGGCTCCTCAAGTCAGAGA-GAGAACAAAGGATTCTCTGT  799

seq1  ACAAGCAAATATGA-TGATCTCTA-ATGACCAACATCACCTCGTGCTCTG  845
      |||||||||||||| ||||||||| ||||| |||||||||||||||||||
seq2  ACAAGCAAATATGATTGATCTCTATATGACAAACATCACCTCGTGCTCTG  849

seq1  GTGGGCACTA  855
      ||||||||||
seq2  GTGGGCACTA  859