BAC Information

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BAC

Clone NameB6Ng01-015F02
ChromosomeY (Build37)
Map Location 573,406 - 573,566
singlet/doubletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015F02.bB6Ng01-015F02.g
ACCDH849612DH849613
length597253
definitionDH849612|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F02, 5' end.DH849613|Mus musculus domesticus DNA, BAC clone: B6Ng01-015F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tggaaatgaaaatttgaataatttgacaagaactacagagacaagcttca
ccaagaaaagaattgaaagagagaaacttaggtgtgtgagatacaataga
agaaatggatatatcaagtgttaaatctaaaaaaaaaaaaaaaagaaaag
aaagatgtggcataaaacatctagaaaaatcaggagtactataaaaagaa
gaaacttcagaataacagacatagacaaatgggacaaaacacagctcaaa
agtctggaaaggggttttcaacaaaattatagaaaaatgagtttcctatc
ctaaataaggagatgcctataaagatacaagtagcacacagagcatcaaa
tagattgtataagaaaagaagttggaaagaacccagatgtccttcaacag
agtaatagatacagaaaatgtggtacatttacataagggagtactactca
gctattaaaaacaaccaattcatgaaatttttaggcaaatggatgaaata
aagaaaatatcctgagtgaggtaatccagtcataaaaaaaaaacacacat
ggtatgcactcacttatatatgaattattagctcaaaagcttcagaa
caataaatacggactataagagaactatcttttgatccttttatgtgata
tttaacctcaattgtttgtttatcgttaaaaagttcagtgttaatcagta
cccccagagctcatgtctttagctgcatatgtatcagaagatggcctagt
cgggcatcattgggaagagaggccccttggttttacaaactttatatgct
tcagtactggggaacgccagggccaagaagtgggagtgggtaggtagggg
gat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573406_573566
seq2: B6Ng01-015F02.g_180_327

seq1  CAGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGC  50
      |||||||||||||| ||||||||||||||||||||||||||||||| || 
seq2  CAGAGCTCATGTCTTTAGCTGCATATGTATCAGAAGATGGCCTAGTCGGG  50

seq1  CATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAG  100
      ||||||||||||||||||||||||||| || ||||||||||||||  |||
seq2  CATCATTGGGAAGAGAGGCCCCTTGGTTTTACAAACTTTATATGCTTCAG  100

seq1  TACAGGGGAACACCAGGGCCAAGAAGTGGGAGAAGGTGGGTAGGGTAGCA  150
      ||| ||||||| |||||||||||||||||||    ||||||         
seq2  TACTGGGGAACGCCAGGGCCAAGAAGTGGGA----GTGGGT---------  137

seq1  AGGCAGGGGGA  161
      ||| |||||||
seq2  AGGTAGGGGGA  148