BAC Information

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BAC

Clone NameB6Ng01-020M14
Chromosome7 (Build37)Y (Build37)
Map Location 58,181,650 - 58,182,3851,407,346 - 1,407,410
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlc6a5, Nell1, 4933405O20Rik
Downstream geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020M14.bB6Ng01-020M14.g
ACCDH853482DH853483
length736556
definitionDH853482|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M14, 5' end.DH853483|Mus musculus domesticus DNA, BAC clone: B6Ng01-020M14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(58,181,650 - 58,182,385)(1,407,346 - 1,407,410)
sequence
acctagtaaatagaagcgtgaaactgagtgggctaggtgtggggccccac
agaagccaggcctgcaagatggaccaggggagcacagctcatgtggttga
agttcgtatataccatagcgtcagcagcaggtcacgtggtgaaagcagtt
gggtgcccacaatgggttggtggcaagagttctggcctggtccgctggcg
gtggtggcaatagccactctgagtagcaatggcaactgagctgtgtacct
cccgcagctgtggccacagaccatggggccctggcccacgctgcagtttt
accgccgccgctggggtccctgtcacagcgctccacagtggctgttggca
ttacccactgacttttcccgggttttggcaccaaatgatgtgttagaatg
gcgggtcacaagagacagctgtatgacagtgcctggcaaatacagaagag
gatgctcacagccgtctgttggatggaacacagggcccccaatgaaggag
ctagagaaagtaaccaaggagctgaatgggtctgcaaccctataggtaga
acaagaatatgaactaaccagtaccccagagttcctgtctctagctgcat
atgtagcagaagatggcctagtcagccatcactgggaggagaggcccttg
gtcttgtgtggatcatatgccccagtacaggagaatgccagggcctgaaa
gcagttgtgtgtgggttggggagcagggcggggagg
gaattctctgtttaagtctataccccactttttgattttgttgtttggtt
ttttggtgattaacttcttgagttctttatatgttttgtatattaaccct
ctatcggatgtgggattaatgacgatttttttctcagtcagtaggttgca
gatttgtcttattgactatgtcctttgccttacagaagttttccagtatt
atgaggtcccatttatcttgatcttagagcatgagccattggagttctgt
ttagaaaatttccccttgtgccaatgagttcaaggctctttcccactttc
tcttctttagattcagtgtatctggttttatgttgaggtctttgatccac
ttggacttgagctttatacaaggtgacaaatatgggtctattttcattct
tctaatacagacagccagttagatcagcaccatttattgaagatgctttc
ttttttccattgtatatttttggcatttttgtcaaagattaagtgacagt
aagtgtgtggttttatttctgggtcttcaattctattccattgatcaaca
tgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58181650_58182385
seq2: B6Ng01-020M14.b_58_793 (reverse)

seq1  CCTCCCCGCCCTGCTCCCCAACCCACACACAACTGCTTTCAGGCCCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCGCCCTGCTCCCCAACCCACACACAACTGCTTTCAGGCCCTGGC  50

seq1  ATTCTCCTGTACTGGGGCATATGATCTTCACAAGACCAAGGGCCTCTCCT  100
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  ATTCTCCTGTACTGGGGCATATGATCCACACAAGACCAAGGGCCTCTCCT  100

seq1  CCCAGTGATGGCTGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGATGGCTGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGAC  150

seq1  AGGAACTCTGGGGTACTGGTTAGTTCATATTCTTGTTCTACCTATAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCTGGGGTACTGGTTAGTTCATATTCTTGTTCTACCTATAGGGT  200

seq1  TGCAGACCCATTCAGCTCCTTGGTTACTTTCTCTAGCTCCTTCATTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACCCATTCAGCTCCTTGGTTACTTTCTCTAGCTCCTTCATTGGGG  250

seq1  GCCCTGTGTTCCATCCAACAGACGGCTGTGAGCATCCTCTTCTGTATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTGTTCCATCCAACAGACGGCTGTGAGCATCCTCTTCTGTATTTG  300

seq1  CCAGGCACTGTCATACAGCTGTCTCTTGTGACCCGCCATTCTAACACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACTGTCATACAGCTGTCTCTTGTGACCCGCCATTCTAACACATC  350

seq1  ATTTGGTGCCAAAACCCGGGAAAAGTCAGTGGGTAATGCCAACAGCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTGCCAAAACCCGGGAAAAGTCAGTGGGTAATGCCAACAGCCACT  400

seq1  GTGGAGCGCTGTGACAGGGACCCCAGCGGCGGCGGTAAAACTGCAGCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCGCTGTGACAGGGACCCCAGCGGCGGCGGTAAAACTGCAGCGTG  450

seq1  GGCCAGGGCCCCATGGTCTGTGGCCACAGCTGCGGGAGGTACACAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGCCCCATGGTCTGTGGCCACAGCTGCGGGAGGTACACAGCTCA  500

seq1  GTTGCCATTGCTACTCAGAGTGGCTATTGCCACCACCGCCAGCGGACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCATTGCTACTCAGAGTGGCTATTGCCACCACCGCCAGCGGACCAG  550

seq1  GCCAGAACTCTTGCCACCAACCCATTGTGGGCACCCAACTGCTTTCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACTCTTGCCACCAACCCATTGTGGGCACCCAACTGCTTTCACCA  600

seq1  CGTGACCTGCTGCTGACGCTATGGTATATACGAACTTCAACCACATGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACCTGCTGCTGACGCTATGGTATATACGAACTTCAACCACATGAGC  650

seq1  TGTGCTCCCCTGGTCCATCTTGCAGGCCTGGCTTCTGTGGGGCCCCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCCCCTGGTCCATCTTGCAGGCCTGGCTTCTGTGGGGCCCCACAC  700

seq1  CTAGCCCACTCAGTTTCACGCTTCTATTTACTAGGT  736
      ||||||||||||||||||||||||||||||||||||
seq2  CTAGCCCACTCAGTTTCACGCTTCTATTTACTAGGT  736

seq1: chrY_1407346_1407410
seq2: B6Ng01-020M14.g_545_609

seq1  TTTGTCAAAGATCAAGTGACTATAGGTGTGTGGGTTCATTTCTGGGTCTT  50
      |||||||||||| |||||||  || |||||||| || |||||||||||||
seq2  TTTGTCAAAGATTAAGTGACAGTAAGTGTGTGGTTTTATTTCTGGGTCTT  50

seq1  CAATTCTATTCCATT  65
      |||||||||||||||
seq2  CAATTCTATTCCATT  65